RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 F13BP05160 661 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 MAOBP27338 520 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 HOXA10P31260 410 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 ORC1Q13415 861 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 PAOXQ6QHF9 649 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 DTX1Q86Y01 620 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 TCF12Q99081 682 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 EHD4Q9H223 541 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 LEMD3Q9Y2U8 911 aa7.48□□□□□ -1.21
CDC42BPA-212ENST00000478573 WNT11O96014 354 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 CYP11A1P05108 521 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 NEFLP07196 543 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 RAB6AP20340 208 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 SOX4Q06945 474 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 POU4F3Q15319 338 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 ZNF423Q2M1K9 1284 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 AKAP4Q5JQC9 854 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 C2CD4AQ8NCU7 369 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 TMC1Q8TDI8 760 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 AP4E1Q9UPM8 1137 aa7.47□□□□□ -1.21
CDC42BPA-212ENST00000478573 PAX4O43316 350 aa7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 CTSBP07858 339 aa7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 ADH5P11766 374 aa7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 RAD18Q9NS91 495 aa7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 COL17A1Q9UMD9 1497 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-212ENST00000478573 CPNE3O75131 537 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 TAL1P17542 331 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 PDE3BQ13370 1112 aa7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 DYMQ7RTS9 669 aa7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 NRSN2Q9GZP1 204 aa7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 ACTL7BQ9Y614 415 aa7.45□□□□□ -1.22
CDC42BPA-212ENST00000478573 ECEL1O95672 775 aa7.44□□□□□ -1.22
CDC42BPA-212ENST00000478573 ARHGAP4P98171 946 aa7.44□□□□□ -1.22
CDC42BPA-212ENST00000478573 PDE3AQ14432 1141 aa7.44□□□□□ -1.22
CDC42BPA-212ENST00000478573 HP1BP3Q5SSJ5 553 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-212ENST00000478573 DDX54Q8TDD1 881 aaKnown RBP7.44□□□□□ -1.22
CDC42BPA-212ENST00000478573 GADD45BO75293 160 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 NFICP08651 508 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 FOSL1P15407 271 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 ADMP35318 185 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 ECM1Q16610 540 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 KIAA0319Q5VV43 1072 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 METTL22Q9BUU2 404 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 ZNF576Q9H609 170 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 PRKAG2Q9UGJ0 569 aa7.43□□□□□ -1.22
CDC42BPA-212ENST00000478573 CYP26A1O43174 497 aa7.42□□□□□ -1.22
CDC42BPA-212ENST00000478573 TRIM56Q9BRZ2 755 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-212ENST00000478573 NIF3L1Q9GZT8 377 aa7.42□□□□□ -1.22
CDC42BPA-212ENST00000478573 ZFYVE1Q9HBF4 777 aa7.42□□□□□ -1.22
CDC42BPA-212ENST00000478573 FAM170BA6NMN3 283 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 B3GALT4O96024 378 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 ASPAP45381 313 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 MAP7Q14244 749 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 ZAR1Q86SH2 424 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 KRTAP1-3Q8IUG1 177 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 EZH1Q92800 747 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 CCDC74AQ96AQ1 378 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 FAM129BQ96TA1 746 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 LGR6Q9HBX8 967 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 LRRC4CQ9HCJ2 640 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 FAM105AQ9NUU6 356 aa7.41□□□□□ -1.22
CDC42BPA-212ENST00000478573 EIF1AYO14602 144 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-212ENST00000478573 CPSF6Q16630 551 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDC42BPA-212ENST00000478573 MSMPQ1L6U9 139 aa7.4□□□□□ -1.22
CDC42BPA-212ENST00000478573 DAGLAQ9Y4D2 1042 aa7.4□□□□□ -1.22
CDC42BPA-212ENST00000478573 GPR182O15218 404 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 PDIA4P13667 645 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 DUSP27Q5VZP5 1158 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 RETREG2Q8NC44 543 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 ZC3H12CQ9C0D7 883 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 SEMA6CQ9H3T2 930 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 CCDC39Q9UFE4 941 aa7.39□□□□□ -1.23
CDC42BPA-212ENST00000478573 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-212ENST00000478573 ITPKAP23677 461 aa7.38□□□□□ -1.23
CDC42BPA-212ENST00000478573 ZNF765Q7L2R6 523 aa7.38□□□□□ -1.23
CDC42BPA-212ENST00000478573 CITED4Q96RK1 184 aa7.38□□□□□ -1.23
CDC42BPA-212ENST00000478573 GOLGA2P5Q9HBQ8 144 aa7.38□□□□□ -1.23
CDC42BPA-212ENST00000478573 RNF114Q9Y508 228 aa7.38□□□□□ -1.23
CDC42BPA-212ENST00000478573 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 AOC2O75106 756 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 AP3B2Q13367 1082 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 TXNDC2Q86VQ3 553 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 VSIG10LQ86VR7 867 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 TP53INP2Q8IXH6 220 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 GATA6Q92908 595 aa7.37□□□□□ -1.23
CDC42BPA-212ENST00000478573 WDR18Q9BV38 432 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms