RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ZBTB47Q9UFB7 747 aaPredicted RBP19.39■□□□□ 0.69
COPS3-207ENST00000477299 H7C1D1 291 aa19.38■□□□□ 0.69
COPS3-207ENST00000477299 CHGBP05060 677 aa19.38■□□□□ 0.69
COPS3-207ENST00000477299 PDE1AP54750 535 aa19.38■□□□□ 0.69
COPS3-207ENST00000477299 PDS5AQ29RF7 1337 aaKnown RBP19.38■□□□□ 0.69
COPS3-207ENST00000477299 TBC1D22AQ8WUA7 517 aa19.38■□□□□ 0.69
COPS3-207ENST00000477299 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
COPS3-207ENST00000477299 SALL1Q9NSC2 1324 aa19.38■□□□□ 0.69
COPS3-207ENST00000477299 MYH7P12883 1935 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 GOLIM4O00461 696 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 NBPF9Q3BBW0 867 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 SLFNL1Q499Z3 407 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 EAPPQ56P03 285 aaPredicted RBP19.37■□□□□ 0.69
COPS3-207ENST00000477299 ERICH6BQ5W0A0 696 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 CENPQQ7L2Z9 268 aaPredicted RBP19.37■□□□□ 0.69
COPS3-207ENST00000477299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.37■□□□□ 0.69
COPS3-207ENST00000477299 HAUS7Q99871 368 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 MYOZ2Q9NPC6 264 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 STAP2Q9UGK3 403 aa19.37■□□□□ 0.69
COPS3-207ENST00000477299 SCAF8Q9UPN6 1271 aaKnown RBP19.37■□□□□ 0.69
COPS3-207ENST00000477299 LDHBP07195 334 aaKnown RBP19.36■□□□□ 0.69
COPS3-207ENST00000477299 CFAP100Q494V2 611 aa19.36■□□□□ 0.69
COPS3-207ENST00000477299 PRMT6Q96LA8 375 aaPredicted RBP19.36■□□□□ 0.69
COPS3-207ENST00000477299 ADARB2Q9NS39 739 aaKnown RBP19.36■□□□□ 0.69
COPS3-207ENST00000477299 ECM29Q5VYK3 1845 aa19.36■□□□□ 0.69
COPS3-207ENST00000477299 IQCA1LA6NCM1 817 aa19.35■□□□□ 0.69
COPS3-207ENST00000477299 MECOMQ03112 1051 aa19.35■□□□□ 0.69
COPS3-207ENST00000477299 KIF4BQ2VIQ3 1234 aa19.35■□□□□ 0.69
COPS3-207ENST00000477299 DLK2Q6UY11 383 aa19.35■□□□□ 0.69
COPS3-207ENST00000477299 ERICH6Q7L0X2 663 aa19.35■□□□□ 0.69
COPS3-207ENST00000477299 ZBED3Q96IU2 234 aaPredicted RBP19.35■□□□□ 0.69
COPS3-207ENST00000477299 RAI14Q9P0K7 980 aa19.35■□□□□ 0.69
COPS3-207ENST00000477299 TTC41PQ6P2S7 1318 aa19.34■□□□□ 0.69
COPS3-207ENST00000477299 CRKP46108 304 aa19.34■□□□□ 0.69
COPS3-207ENST00000477299 OGFOD1Q8N543 542 aa19.34■□□□□ 0.69
COPS3-207ENST00000477299 NSUN4Q96CB9 384 aaKnown RBP19.34■□□□□ 0.69
COPS3-207ENST00000477299 PAG1Q9NWQ8 432 aa19.34■□□□□ 0.69
COPS3-207ENST00000477299 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
COPS3-207ENST00000477299 AK9Q5TCS8 1911 aa19.33■□□□□ 0.69
COPS3-207ENST00000477299 WNT10BO00744 389 aa19.33■□□□□ 0.68
COPS3-207ENST00000477299 RBM5P52756 815 aaKnown RBP eCLIP19.33■□□□□ 0.68
COPS3-207ENST00000477299 ADGRA1Q86SQ6 560 aa19.33■□□□□ 0.68
COPS3-207ENST00000477299 GPATCH3Q96I76 525 aa19.33■□□□□ 0.68
COPS3-207ENST00000477299 CLEC11AQ9Y240 323 aa19.33■□□□□ 0.68
COPS3-207ENST00000477299 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
COPS3-207ENST00000477299 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
COPS3-207ENST00000477299 SPTY2D1Q68D10 685 aaPredicted RBP19.32■□□□□ 0.68
COPS3-207ENST00000477299 USP50Q70EL3 339 aaPredicted RBP19.32■□□□□ 0.68
COPS3-207ENST00000477299 ZGPATQ8N5A5 531 aaKnown RBP19.32■□□□□ 0.68
COPS3-207ENST00000477299 HDAC9Q9UKV0 1011 aa19.32■□□□□ 0.68
COPS3-207ENST00000477299 SUGT1Q9Y2Z0 365 aa19.32■□□□□ 0.68
COPS3-207ENST00000477299 DAGLAQ9Y4D2 1042 aa19.32■□□□□ 0.68
COPS3-207ENST00000477299 CDK5RAP2Q96SN8 1893 aa19.32■□□□□ 0.68
COPS3-207ENST00000477299 GLRX3O76003 335 aaKnown RBP19.31■□□□□ 0.68
COPS3-207ENST00000477299 FMR1Q06787 632 aaKnown RBP eCLIP19.31■□□□□ 0.68
COPS3-207ENST00000477299 DLGAP5Q15398 846 aa19.31■□□□□ 0.68
COPS3-207ENST00000477299 MAP1SQ66K74 1059 aaPredicted RBP19.31■□□□□ 0.68
COPS3-207ENST00000477299 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
COPS3-207ENST00000477299 DZIP1Q86YF9 867 aaKnown RBP19.31■□□□□ 0.68
COPS3-207ENST00000477299 TDRD3Q9H7E2 651 aaKnown RBP19.31■□□□□ 0.68
COPS3-207ENST00000477299 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
COPS3-207ENST00000477299 CLRN2A0PK11 232 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 MAGEB6Q8N7X4 407 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 MTMR14Q8NCE2 650 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 TEKT1Q969V4 418 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 OSBPL3Q9H4L5 887 aa19.3■□□□□ 0.68
COPS3-207ENST00000477299 ERC2O15083 957 aa19.29■□□□□ 0.68
COPS3-207ENST00000477299 CACNB3P54284 484 aa19.29■□□□□ 0.68
COPS3-207ENST00000477299 HDLBPQ00341 1268 aaKnown RBP19.29■□□□□ 0.68
COPS3-207ENST00000477299 ANGEL2Q5VTE6 544 aaKnown RBP19.29■□□□□ 0.68
COPS3-207ENST00000477299 HHIPL2Q6UWX4 724 aa19.29■□□□□ 0.68
COPS3-207ENST00000477299 PNMA8AQ86V59 439 aaPredicted RBP19.29■□□□□ 0.68
COPS3-207ENST00000477299 MRIQ9BWK5 157 aa19.29■□□□□ 0.68
COPS3-207ENST00000477299 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
COPS3-207ENST00000477299 ZDHHC15Q96MV8 337 aa19.28■□□□□ 0.68
COPS3-207ENST00000477299 GGA3Q9NZ52 723 aa19.28■□□□□ 0.68
COPS3-207ENST00000477299 PGAP2Q9UHJ9 254 aa19.28■□□□□ 0.68
COPS3-207ENST00000477299 MROH7-TTC4A0A0A0MT08 1334 aa19.27■□□□□ 0.68
COPS3-207ENST00000477299 GAKO14976 1311 aa19.27■□□□□ 0.68
COPS3-207ENST00000477299 GSPT1P15170 499 aaKnown RBP19.27■□□□□ 0.68
COPS3-207ENST00000477299 PDE6AP16499 860 aa19.27■□□□□ 0.68
COPS3-207ENST00000477299 CYP7A1P22680 504 aa19.27■□□□□ 0.68
COPS3-207ENST00000477299 RGS3P49796 1198 aa19.27■□□□□ 0.68
COPS3-207ENST00000477299 DYNLL1P63167 89 aaKnown RBP19.27■□□□□ 0.68
COPS3-207ENST00000477299 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.68
COPS3-207ENST00000477299 SLC9C2Q5TAH2 1124 aa19.27■□□□□ 0.68
COPS3-207ENST00000477299 GLIS2Q9BZE0 524 aaPredicted RBP19.27■□□□□ 0.68
COPS3-207ENST00000477299 ZNF70Q9UC06 446 aaPredicted RBP19.27■□□□□ 0.68
COPS3-207ENST00000477299 MAST3O60307 1309 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 TCRBV5S4A2TA0A5A2 114 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 ADM5C9JUS6 153 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 BTDP43251 543 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 MAP3K12Q12852 859 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 PRAMEF18Q5VWM3 479 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 USP48Q86UV5 1035 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 LDHDQ86WU2 507 aa19.26■□□□□ 0.67
COPS3-207ENST00000477299 KBTBD3Q8NAB2 608 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms