RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 DCAF1Q9Y4B6 1507 aa8.67□□□□□ -1.02
PRKD3-208ENST00000475912 DHX15O43143 795 aaKnown RBP8.66□□□□□ -1.02
PRKD3-208ENST00000475912 B3GALT4O96024 378 aa8.66□□□□□ -1.02
PRKD3-208ENST00000475912 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
PRKD3-208ENST00000475912 ZSCAN29Q8IWY8 852 aaPredicted RBP8.66□□□□□ -1.02
PRKD3-208ENST00000475912 ASB16Q96NS5 453 aa8.66□□□□□ -1.02
PRKD3-208ENST00000475912 TMPRSS13Q9BYE2 586 aa8.66□□□□□ -1.02
PRKD3-208ENST00000475912 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
PRKD3-208ENST00000475912 MEGF11A6BM72 1044 aa8.65□□□□□ -1.02
PRKD3-208ENST00000475912 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
PRKD3-208ENST00000475912 FSTP19883 344 aa8.65□□□□□ -1.02
PRKD3-208ENST00000475912 MAPK8P45983 427 aa8.65□□□□□ -1.02
PRKD3-208ENST00000475912 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
PRKD3-208ENST00000475912 NUTM2GQ5VZR2 741 aa8.65□□□□□ -1.02
PRKD3-208ENST00000475912 MYRFLQ96LU7 910 aa8.65□□□□□ -1.02
PRKD3-208ENST00000475912 ERCC6Q03468 1493 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 CTSBP07858 339 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 MAOBP27338 520 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 FCGRTP55899 365 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
PRKD3-208ENST00000475912 FMR1Q06787 632 aaKnown RBP eCLIP8.64□□□□□ -1.03
PRKD3-208ENST00000475912 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.64□□□□□ -1.03
PRKD3-208ENST00000475912 SETDB2Q96T68 719 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
PRKD3-208ENST00000475912 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 STOML1Q9UBI4 398 aa8.64□□□□□ -1.03
PRKD3-208ENST00000475912 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
PRKD3-208ENST00000475912 ECEL1O95672 775 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 CYP11A1P05108 521 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 ZNF157P51786 506 aaPredicted RBP8.63□□□□□ -1.03
PRKD3-208ENST00000475912 FAAP100Q0VG06 881 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 POU4F3Q15319 338 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 EXOSC6Q5RKV6 272 aaKnown RBP8.63□□□□□ -1.03
PRKD3-208ENST00000475912 DTHD1Q6ZMT9 781 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 FAM20CQ8IXL6 584 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 C12orf50Q8NA57 414 aaPredicted RBP8.63□□□□□ -1.03
PRKD3-208ENST00000475912 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
PRKD3-208ENST00000475912 CYP4F12Q9HCS2 524 aa8.63□□□□□ -1.03
PRKD3-208ENST00000475912 GAS2O43903 313 aaKnown RBP8.62□□□□□ -1.03
PRKD3-208ENST00000475912 BMP3P12645 472 aa8.62□□□□□ -1.03
PRKD3-208ENST00000475912 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
PRKD3-208ENST00000475912 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
PRKD3-208ENST00000475912 SUGCTQ9HAC7 445 aa8.62□□□□□ -1.03
PRKD3-208ENST00000475912 SCO2A0A1W2PP80 73 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 HMX2A2RU54 273 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 TIAF1O95411 115 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 DRD2P14416 443 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 RPS26P11Q5JNZ5 115 aaPredicted RBP8.61□□□□□ -1.03
PRKD3-208ENST00000475912 TRIM42Q8IWZ5 723 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 C7orf69Q9H7B7 122 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 WWC3Q9ULE0 1092 aa8.61□□□□□ -1.03
PRKD3-208ENST00000475912 SGO2Q562F6 1265 aa8.6□□□□□ -1.03
PRKD3-208ENST00000475912 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
PRKD3-208ENST00000475912 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
PRKD3-208ENST00000475912 P4HBP07237 508 aaKnown RBP8.59□□□□□ -1.03
PRKD3-208ENST00000475912 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
PRKD3-208ENST00000475912 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
PRKD3-208ENST00000475912 HIF3AQ9Y2N7 669 aa8.59□□□□□ -1.03
PRKD3-208ENST00000475912 AP3B2Q13367 1082 aa8.58□□□□□ -1.04
PRKD3-208ENST00000475912 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
PRKD3-208ENST00000475912 CLEC10AQ8IUN9 316 aa8.58□□□□□ -1.04
PRKD3-208ENST00000475912 C2CD4AQ8NCU7 369 aaPredicted RBP8.58□□□□□ -1.04
PRKD3-208ENST00000475912 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
PRKD3-208ENST00000475912 FAM83CQ9BQN1 747 aa8.58□□□□□ -1.04
PRKD3-208ENST00000475912 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
PRKD3-208ENST00000475912 ADH5P11766 374 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
PRKD3-208ENST00000475912 MAP4P27816 1152 aaKnown RBP8.57□□□□□ -1.04
PRKD3-208ENST00000475912 RXRBP28702 533 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 ATP2B2Q01814 1243 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
PRKD3-208ENST00000475912 NFIAQ12857 509 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 PDE3AQ14432 1141 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 AKAP4Q5JQC9 854 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 HP1BP3Q5SSJ5 553 aaPredicted RBP8.57□□□□□ -1.04
PRKD3-208ENST00000475912 ALG1LQ6GMV1 187 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 ZFYVE1Q9HBF4 777 aa8.57□□□□□ -1.04
PRKD3-208ENST00000475912 GSC2O15499 205 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 USP11P51784 963 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 SLC51AQ86UW1 340 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 OSBPL7Q9BZF2 842 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 ZC3H12CQ9C0D7 883 aaKnown RBP8.56□□□□□ -1.04
PRKD3-208ENST00000475912 RAD18Q9NS91 495 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 RNF112Q9ULX5 631 aa8.56□□□□□ -1.04
PRKD3-208ENST00000475912 ARTNQ5T4W7 220 aa8.55□□□□□ -1.04
PRKD3-208ENST00000475912 CDPF1Q6NVV7 123 aa8.55□□□□□ -1.04
PRKD3-208ENST00000475912 C3orf58Q8NDZ4 430 aa8.55□□□□□ -1.04
PRKD3-208ENST00000475912 TMEM39AQ9NV64 488 aa8.55□□□□□ -1.04
PRKD3-208ENST00000475912 AP4E1Q9UPM8 1137 aa8.55□□□□□ -1.04
PRKD3-208ENST00000475912 AOC2O75106 756 aa8.54□□□□□ -1.04
PRKD3-208ENST00000475912 LDHBP07195 334 aaKnown RBP8.54□□□□□ -1.04
PRKD3-208ENST00000475912 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
PRKD3-208ENST00000475912 FBLIM1Q8WUP2 373 aa8.54□□□□□ -1.04
PRKD3-208ENST00000475912 DBNDD2Q9BQY9 259 aa8.54□□□□□ -1.04
PRKD3-208ENST00000475912 WDR18Q9BV38 432 aa8.54□□□□□ -1.04
PRKD3-208ENST00000475912 CCDC86Q9H6F5 360 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms