RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TUBA1AQ71U36 451 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 TXNDC2Q86VQ3 553 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 APLFQ8IW19 511 aaPredicted RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 CHPFQ8IZ52 775 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 CCDC150Q8NCX0 1101 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 UHMK1Q8TAS1 419 aaKnown RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 SUN5Q8TC36 379 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 USP6NLQ92738 828 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 EZH1Q92800 747 aaPredicted RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 L3MBTL2Q969R5 705 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 PPP1R14BQ96C90 147 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 MRFAP1L1Q96HT8 127 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 C8orf76Q96K31 380 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 NEK1Q96PY6 1258 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 RUFY1Q96T51 708 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 STK31Q9BXU1 1019 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 CCDC68Q9H2F9 335 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 ANTXR1Q9H6X2 564 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 SENP2Q9HC62 589 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 BATF3Q9NR55 127 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 SPTLC3Q9NUV7 552 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 CUEDC1Q9NWM3 386 aaPredicted RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 IP6K2Q9UHH9 426 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 ASAP1Q9ULH1 1129 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 TMED5Q9Y3A6 229 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 TTLL3Q9Y4R7 772 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 GMEB1Q9Y692 573 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 RALGAPBQ86X10 1494 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 ARHGEF12Q9NZN5 1544 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 KIF7Q2M1P5 1343 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 TDRD9Q8NDG6 1382 aaKnown RBP4.4□□□□□ -1.71
LSM2-211ENST00000475835 USP47Q96K76 1375 aa4.4□□□□□ -1.71
LSM2-211ENST00000475835 GOLGA8AA7E2F4 631 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CPLX1O14810 134 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 TTI1O43156 1089 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 NEMFO60524 1076 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 DIAPH2O60879 1101 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 RTN2O75298 545 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 PRPF40AO75400 957 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 AP1G2O75843 785 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 RGS20O76081 388 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 RPN1P04843 607 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 TSPY4P0CV99 314 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 TSPY10P0CW01 314 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 TSPAN7P41732 249 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.71
LSM2-211ENST00000475835 CORO7P57737 925 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 ARPC4P59998 168 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 DDR1Q08345 913 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 MPP3Q13368 585 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 MYBPC3Q14896 1274 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 TNIP1Q15025 636 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 LONRF1Q17RB8 773 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 PLEKHG6Q3KR16 790 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CCDC93Q567U6 631 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 SH2D4BQ5SQS7 431 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CFAP58Q5T655 872 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 RC3H1Q5TC82 1133 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 NAA16Q6N069 864 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 CCBE1Q6UXH8 406 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 ATF7IPQ6VMQ6 1270 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 NEK10Q6ZWH5 1172 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 BEND5Q7L4P6 421 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 TMEM110Q86TL2 294 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 PROSER2Q86WR7 435 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 SKAP1Q86WV1 359 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CCDC170Q8IYT3 715 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 TEX9Q8N6V9 391 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.39□□□□□ -1.71
LSM2-211ENST00000475835 B4GALNT2Q8NHY0 566 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 ZFPM2Q8WW38 1151 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 ERP27Q96DN0 273 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 RBM33Q96EV2 1170 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 FAM163AQ96GL9 167 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 DDX27Q96GQ7 796 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 ZNF496Q96IT1 587 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 MAML3Q96JK9 1138 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 OSBPL9Q96SU4 736 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 XPO4Q9C0E2 1151 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 BHMT2Q9H2M3 363 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 ZSCAN16Q9H4T2 348 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 AS3MTQ9HBK9 375 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 AVENQ9NQS1 362 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 KRT82Q9NSB4 513 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 HDAC6Q9UBN7 1215 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 MKRN1Q9UHC7 482 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 MCM8Q9UJA3 840 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 USTQ9Y2C2 406 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 SLC45A1Q9Y2W3 748 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 IVNS1ABPQ9Y6Y0 642 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CASZ1Q86V15 1759 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 NCKAP5LQ9HCH0 1330 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 CEP170Q5SW79 1584 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 EIF3AQ14152 1382 aaKnown RBP4.39□□□□□ -1.71
LSM2-211ENST00000475835 ANKRD30BQ9BXX2 1392 aa4.39□□□□□ -1.71
LSM2-211ENST00000475835 PDS5BQ9NTI5 1447 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 PZPP20742 1482 aa4.38□□□□□ -1.71
LSM2-211ENST00000475835 A0A087WUV0 522 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms