RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	VEZT	Q9HBM0	779 aa		12.38	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CACNA1F	O60840	1977 aa		12.38	□□□□□ -0.43
PPP2R1A-208	ENST00000473820		F8W031	263 aa	Predicted RBP	12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	PLIN1	O60240	522 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	RBM5	P52756	815 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CRHR2	Q13324	411 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	SLC4A8	Q2Y0W8	1093 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	TMEM57	Q8N5G2	664 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	ANKRD44	Q8N8A2	993 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	HELB	Q8NG08	1087 aa	Predicted RBP	12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	MEIS3	Q99687	375 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CNNM1	Q9NRU3	951 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	PSME4	Q14997	1843 aa		12.37	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	UNCX	A6NJT0	531 aa		12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	TAF5L	O75529	589 aa		12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	FXR1	P51114	621 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CHRND	Q07001	517 aa		12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	RABL6	Q3YEC7	729 aa	Predicted RBP	12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	DZIP1L	Q8IYY4	767 aa	Known RBP	12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	HDAC5	Q9UQL6	1122 aa		12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	PPP2R3B	Q9Y5P8	575 aa		12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	LRRFIP2	Q9Y608	721 aa	Known RBP	12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CENPF	P49454	3210 aa		12.36	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CLRN2	A0PK11	232 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	WDHD1	O75717	1129 aa	Predicted RBP	12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	MYC	P01106	439 aa	Predicted RBP	12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	GNAI3	P08754	354 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	MAP3K11	Q16584	847 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	SLC9C1	Q4G0N8	1177 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	ANKRD13A	Q8IZ07	590 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	KLHDC4	Q8TBB5	520 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	ARMC5	Q96C12	935 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	PUS3	Q9BZE2	481 aa	Known RBP	12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CD209	Q9NNX6	404 aa		12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	COLQ	Q9Y215	455 aa	Predicted RBP	12.35	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	SNAP23	O00161	211 aa		12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	USP2	O75604	605 aa	Predicted RBP	12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	KLRK1	P26718	216 aa		12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CFAP100	Q494V2	611 aa		12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	ITPRIP	Q8IWB1	547 aa		12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	PANK1	Q8TE04	598 aa		12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	ZBED3	Q96IU2	234 aa	Predicted RBP	12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	CHMP4B	Q9H444	224 aa	Known RBP	12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	ZFYVE28	Q9HCC9	887 aa		12.34	□□□□□ -0.43
PPP2R1A-208	ENST00000473820	RLBP1	P12271	317 aa		12.33	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	MTMR14	Q8NCE2	650 aa		12.33	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	OPTN	Q96CV9	577 aa		12.33	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	PRMT6	Q96LA8	375 aa	Predicted RBP	12.33	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	ELP3	Q9H9T3	547 aa		12.33	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	COL1A1	P02452	1464 aa	Predicted RBP	12.33	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	GNAI2	P04899	355 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	RASA3	Q14644	834 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	KIF22	Q14807	665 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	TAF1C	Q15572	869 aa	Predicted RBP	12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	LRRC24	Q50LG9	513 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	ZNF333	Q96JL9	665 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	PTPN18	Q99952	460 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	RIPOR2	Q9Y4F9	1068 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	PCDHAC2	Q9Y5I4	1007 aa		12.32	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	TESPA1	A2RU30	521 aa	Predicted RBP	12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	SPDYE2B	A6NHP3	402 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820		H0YGN5	161 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	SPDYE6	P0CI01	402 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	METTL24	Q5JXM2	366 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	C20orf194	Q5TEA3	1177 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	ZNF804A	Q7Z570	1209 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	DPF3	Q92784	378 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	SIL1	Q9H173	461 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	JAG2	Q9Y219	1238 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	PTCH2	Q9Y6C5	1203 aa		12.31	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	BRCA2	P51587	3418 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	CEP290	O15078	2479 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	CCL15-CCL14	A0A0B4J2E2	113 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	ZBTB7B	O15156	539 aa	Predicted RBP	12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	SRGAP3	O43295	1099 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	GJA5	P36382	358 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	RFX5	P48382	616 aa	Predicted RBP	12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	GTF2A2	P52657	109 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	TNFAIP1	Q13829	316 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	CCL15	Q16663	113 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	CERS5	Q8N5B7	392 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	CSAD	Q9Y600	493 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	MROH5	Q6ZUA9	1318 aa		12.3	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	EYA2	O00167	538 aa		12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	MAP3K9	P80192	1104 aa		12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	C1orf115	Q9H7X2	142 aa		12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	PA2G4	Q9UQ80	394 aa	Known RBP	12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	COG6	Q9Y2V7	657 aa		12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	HTT	P42858	3142 aa		12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	SPEF2	Q9C093	1822 aa		12.29	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	ECM2	O94769	699 aa	Predicted RBP	12.28	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	TNNI2	P48788	182 aa		12.28	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	CHRDL2	Q6WN34	429 aa		12.28	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	SH3TC2	Q8TF17	1288 aa		12.28	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	BRI3BP	Q8WY22	251 aa		12.28	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	TRIOBP	Q9H2D6	2365 aa		12.28	□□□□□ -0.44
PPP2R1A-208	ENST00000473820	TCP10L2	B9ZVM9	353 aa		12.27	□□□□□ -0.45
PPP2R1A-208	ENST00000473820	PDE8B	O95263	885 aa		12.27	□□□□□ -0.45
PPP2R1A-208	ENST00000473820	IL1R1	P14778	569 aa		12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms