RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	RFX5	P48382	616 aa	Predicted RBP	11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	BCAM	P50895	628 aa		11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	MKRN3	Q13064	507 aa	Known RBP	11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	RASA3	Q14644	834 aa		11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	SPDYE2	Q495Y8	402 aa		11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	LDLRAD1	Q5T700	205 aa		11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	DZIP1L	Q8IYY4	767 aa	Known RBP	11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	LPIN2	Q92539	896 aa		11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	FBXO3	Q9UK99	471 aa		11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	LRRFIP2	Q9Y608	721 aa	Known RBP	11.13	□□□□□ -0.63
CHEK2-223	ENST00000472807	MAST3	O60307	1309 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	AOX1	Q06278	1338 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	UNCX	A6NJT0	531 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	CCDC85C	A6NKD9	419 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	CIAO1	O76071	339 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	FGFR2	P21802	821 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	IREB2	P48200	963 aa	Known RBP	11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	TNNI2	P48788	182 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	POLA2	Q14181	598 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	MAP3K11	Q16584	847 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	SPRYD7	Q5W111	196 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	ARHGAP45	Q92619	1136 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	TEKT1	Q969V4	418 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	SLC10A4	Q96EP9	437 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	SIL1	Q9H173	461 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	TDRD3	Q9H7E2	651 aa	Known RBP	11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	ZNF70	Q9UC06	446 aa	Predicted RBP	11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	FZD1	Q9UP38	647 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	SUGT1	Q9Y2Z0	365 aa		11.12	□□□□□ -0.63
CHEK2-223	ENST00000472807	IPO8	O15397	1037 aa	Known RBP	11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	ZBTB48	P10074	688 aa	Predicted RBP	11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	IL15	P40933	162 aa	Predicted RBP	11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	TM4SF4	P48230	202 aa		11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	HDLBP	Q00341	1268 aa	Known RBP	11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	ATP2B3	Q16720	1220 aa		11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	ATG9A	Q7Z3C6	839 aa		11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	TMOD2	Q9NZR1	351 aa		11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	CEP126	Q9P2H0	1117 aa		11.11	□□□□□ -0.63
CHEK2-223	ENST00000472807	MANSC4	A6NHS7	340 aa	Predicted RBP	11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	TCP10L2	B9ZVM9	353 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	GNAI3	P08754	354 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	GRIK5	Q16478	980 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	INTS3	Q68E01	1043 aa	Known RBP	11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	CTU1	Q7Z7A3	348 aa	Known RBP	11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	WDR66	Q8TBY9	1149 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	CLMN	Q96JQ2	1002 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	ZDHHC15	Q96MV8	337 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	MEIS3	Q99687	375 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	GNL3L	Q9NVN8	582 aa	Known RBP	11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	OTOF	Q9HC10	1997 aa		11.1	□□□□□ -0.63
CHEK2-223	ENST00000472807	HTT	P42858	3142 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	TBC1D8	O95759	1140 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	ALDH1A1	P00352	501 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	ANKRD13A	Q8IZ07	590 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	FRAT1	Q92837	279 aa	Predicted RBP	11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	WNK4	Q96J92	1243 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	MRI	Q9BWK5	157 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	TMEM39B	Q9GZU3	492 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	CENPF	P49454	3210 aa		11.09	□□□□□ -0.63
CHEK2-223	ENST00000472807	LAMB1	P07942	1786 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	SRGAP3	O43295	1099 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	USP2	O75604	605 aa	Predicted RBP	11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	TRIM27	P14373	513 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	INHBE	P58166	350 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	ATF7IP	Q6VMQ6	1270 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	HOOK2	Q96ED9	719 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	COPRS	Q9NQ92	184 aa		11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	PA2G4	Q9UQ80	394 aa	Known RBP	11.08	□□□□□ -0.64
CHEK2-223	ENST00000472807	SEMA3E	O15041	775 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	CACNB3	P54284	484 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	NOM1	Q5C9Z4	860 aa	Known RBP	11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	FKBP1C	Q5VVH2	108 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	DIEXF	Q68CQ4	756 aa	Known RBP	11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	HHIPL2	Q6UWX4	724 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	IFNL1	Q8IU54	200 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	CDAN1	Q8IWY9	1227 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	TEPSIN	Q96N21	525 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	CFHR5	Q9BXR6	569 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	DENND2A	Q9ULE3	1009 aa		11.07	□□□□□ -0.64
CHEK2-223	ENST00000472807	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	GPR25	O00155	361 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	BCAR3	O75815	825 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	GNAI2	P04899	355 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	LDHB	P07195	334 aa	Known RBP	11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	MTX1	Q13505	466 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	VGLL4	Q14135	290 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	PKN2	Q16513	984 aa	Known RBP	11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	OTUD7B	Q6GQQ9	843 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	CHRDL2	Q6WN34	429 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	FAM83A	Q86UY5	434 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	MIER1	Q8N108	512 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	ZGPAT	Q8N5A5	531 aa	Known RBP	11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	OPTN	Q96CV9	577 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	ELP3	Q9H9T3	547 aa		11.06	□□□□□ -0.64
CHEK2-223	ENST00000472807	AKAP2	Q9Y2D5	859 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms