RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 POTEJP0CG39 1038 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 MX1P20591 662 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 CRKP46108 304 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 HDLBPQ00341 1268 aaKnown RBP15.02■□□□□ -0
PRKCB-205ENST00000472066 DLGAP5Q15398 846 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 TSHZ3Q63HK5 1081 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 ERICH6Q7L0X2 663 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 CENPQQ7L2Z9 268 aaPredicted RBP15.02■□□□□ -0
PRKCB-205ENST00000472066 MTMR14Q8NCE2 650 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 DNAJC2Q99543 621 aaKnown RBP15.02■□□□□ -0
PRKCB-205ENST00000472066 HAUS7Q99871 368 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 ANTXR1Q9H6X2 564 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 PIH1D3Q9NQM4 214 aaKnown RBP15.02■□□□□ -0
PRKCB-205ENST00000472066 LRP2BPQ9P2M1 347 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 STAP2Q9UGK3 403 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
PRKCB-205ENST00000472066 PSME4Q14997 1843 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 TOMM70O94826 608 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 RBM5P52756 815 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRKCB-205ENST00000472066 CFAP100Q494V2 611 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 LDHDQ86WU2 507 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 ZC3H15Q8WU90 426 aaKnown RBP15.01□□□□□ -0.01
PRKCB-205ENST00000472066 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 ZBED3Q96IU2 234 aaPredicted RBP15.01□□□□□ -0.01
PRKCB-205ENST00000472066 PPP4R2Q9NY27 417 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 PGAP2Q9UHJ9 254 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
PRKCB-205ENST00000472066 GOLIM4O00461 696 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 WNT10BO00744 389 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 ERC2O15083 957 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 PDE1AP54750 535 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 MECOMQ03112 1051 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 TTF1Q15361 905 aaPredicted RBP15□□□□□ -0.01
PRKCB-205ENST00000472066 NBPF9Q3BBW0 867 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 HHIPL2Q6UWX4 724 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 DZIP1Q86YF9 867 aaKnown RBP15□□□□□ -0.01
PRKCB-205ENST00000472066 PI4K2BQ8TCG2 481 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 PRMT6Q96LA8 375 aaPredicted RBP15□□□□□ -0.01
PRKCB-205ENST00000472066 PAG1Q9NWQ8 432 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 RAI14Q9P0K7 980 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 SCN4AP35499 1836 aa15□□□□□ -0.01
PRKCB-205ENST00000472066 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 IGSF3O75054 1194 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
PRKCB-205ENST00000472066 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 PDE4AP27815 886 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 DIXDC1Q155Q3 683 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 RBM46Q8TBY0 533 aaKnown RBP14.99□□□□□ -0.01
PRKCB-205ENST00000472066 ZNF384Q8TF68 577 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 NSUN4Q96CB9 384 aaKnown RBP14.99□□□□□ -0.01
PRKCB-205ENST00000472066 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
PRKCB-205ENST00000472066 ZDHHC15Q96MV8 337 aa14.99□□□□□ -0.01
PRKCB-205ENST00000472066 ASTN2O75129 1339 aaPredicted RBP14.98□□□□□ -0.01
PRKCB-205ENST00000472066 GSTO1P78417 241 aa14.98□□□□□ -0.01
PRKCB-205ENST00000472066 CHADLQ6NUI6 762 aa14.98□□□□□ -0.01
PRKCB-205ENST00000472066 SLF2Q8IX21 1173 aa14.98□□□□□ -0.01
PRKCB-205ENST00000472066 FAM163AQ96GL9 167 aaPredicted RBP14.98□□□□□ -0.01
PRKCB-205ENST00000472066 IDH1O75874 414 aaKnown RBP14.97□□□□□ -0.01
PRKCB-205ENST00000472066 LDHCP07864 332 aa14.97□□□□□ -0.01
PRKCB-205ENST00000472066 MAP3K12Q12852 859 aa14.97□□□□□ -0.01
PRKCB-205ENST00000472066 ANGEL2Q5VTE6 544 aaKnown RBP14.97□□□□□ -0.01
PRKCB-205ENST00000472066 MAP1SQ66K74 1059 aaPredicted RBP14.97□□□□□ -0.01
PRKCB-205ENST00000472066 APOBEC3HQ6NTF7 200 aaKnown RBP14.97□□□□□ -0.01
PRKCB-205ENST00000472066 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
PRKCB-205ENST00000472066 DCPSQ96C86 337 aaKnown RBP14.97□□□□□ -0.01
PRKCB-205ENST00000472066 OSBPL3Q9H4L5 887 aa14.97□□□□□ -0.01
PRKCB-205ENST00000472066 DAGLAQ9Y4D2 1042 aa14.97□□□□□ -0.01
PRKCB-205ENST00000472066 GAKO14976 1311 aa14.96□□□□□ -0.01
PRKCB-205ENST00000472066 AOX1Q06278 1338 aa14.96□□□□□ -0.01
PRKCB-205ENST00000472066 MYO1BO43795 1136 aa14.96□□□□□ -0.01
PRKCB-205ENST00000472066 MAP4K4O95819 1239 aaPredicted RBP14.96□□□□□ -0.01
PRKCB-205ENST00000472066 NAA16Q6N069 864 aaPredicted RBP14.96□□□□□ -0.01
PRKCB-205ENST00000472066 CNTROBQ8N137 903 aa14.96□□□□□ -0.01
PRKCB-205ENST00000472066 TDRD3Q9H7E2 651 aaKnown RBP14.96□□□□□ -0.01
PRKCB-205ENST00000472066 GGA3Q9NZ52 723 aa14.96□□□□□ -0.01
PRKCB-205ENST00000472066 MROH7-TTC4A0A0A0MT08 1334 aa14.95□□□□□ -0.02
PRKCB-205ENST00000472066 CLRN2A0PK11 232 aa14.95□□□□□ -0.02
PRKCB-205ENST00000472066 CYP7A1P22680 504 aa14.95□□□□□ -0.02
PRKCB-205ENST00000472066 FSTL1Q12841 308 aa14.95□□□□□ -0.02
PRKCB-205ENST00000472066 SLC9C2Q5TAH2 1124 aa14.95□□□□□ -0.02
PRKCB-205ENST00000472066 TMED8Q6PL24 325 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-205ENST00000472066 MAGEB6Q8N7X4 407 aa14.95□□□□□ -0.02
PRKCB-205ENST00000472066 ZNF70Q9UC06 446 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-205ENST00000472066 PITPNM2Q9BZ72 1349 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 AKAP11Q9UKA4 1901 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 GPR75-ASB3A0A0A6YYF3 556 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 ITGBL1O95965 494 aaPredicted RBP14.94□□□□□ -0.02
PRKCB-205ENST00000472066 BTDP43251 543 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 CDC42EP5Q6NZY7 148 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 CDC37L1Q7L3B6 337 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 USP48Q86UV5 1035 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 KBTBD3Q8NAB2 608 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 USP40Q9NVE5 1235 aa14.94□□□□□ -0.02
PRKCB-205ENST00000472066 ADAMTSL1Q8N6G6 1762 aa14.93□□□□□ -0.02
PRKCB-205ENST00000472066 PDE6AP16499 860 aa14.93□□□□□ -0.02
PRKCB-205ENST00000472066 KRT26Q7Z3Y9 468 aa14.93□□□□□ -0.02
PRKCB-205ENST00000472066 ADGRA1Q86SQ6 560 aa14.93□□□□□ -0.02
PRKCB-205ENST00000472066 SULF1Q8IWU6 871 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms