RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 WDR26Q9H7D7 661 aa2.92□□□□□ -1.94
UBXN4-207ENST00000471246 FNDC3AQ9Y2H6 1198 aaKnown RBP2.92□□□□□ -1.94
UBXN4-207ENST00000471246 LOC102724428A0A0B4J2F2 783 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 A6NHS1 94 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 PDGFAP04085 211 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 CYP2E1P05181 493 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 SYN1P17600 705 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 RXRBP28702 533 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 EIF1AXP47813 144 aaKnown RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 SIK1P57059 783 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 ATP11AP98196 1134 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 DNM1Q05193 864 aaKnown RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 ZNF211Q13398 564 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 NFKBIBQ15653 356 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 SKOR2Q2VWA4 1001 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 NOM1Q5C9Z4 860 aaKnown RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 COL13A1Q5TAT6 717 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 PDE12Q6L8Q7 609 aaKnown RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 B4GALNT3Q6L9W6 998 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 ZNF438Q7Z4V0 828 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 PRRT2Q7Z6L0 340 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 ZAR1Q86SH2 424 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 RETREG2Q8NC44 543 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 GATA6Q92908 595 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 LIN37Q96GY3 246 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 ADAM19Q9H013 955 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 RBSNQ9H1K0 784 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 LRRC4CQ9HCJ2 640 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 PARD6AQ9NPB6 346 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 ABI2Q9NYB9 513 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-207ENST00000471246 TMEM63CQ9P1W3 806 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 MTMR7Q9Y216 660 aa2.91□□□□□ -1.94
UBXN4-207ENST00000471246 GAS2O43903 313 aaKnown RBP2.9□□□□□ -1.95
UBXN4-207ENST00000471246 KIF4AO95239 1232 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 ABL1P00519 1130 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 CD8BP10966 210 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 MZF1P28698 734 aaPredicted RBP2.9□□□□□ -1.95
UBXN4-207ENST00000471246 HYAL2Q12891 473 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 TTC39BQ5VTQ0 682 aaPredicted RBP2.9□□□□□ -1.95
UBXN4-207ENST00000471246 PRR23BQ6ZRT6 265 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 ZSWIM9Q86XI8 627 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 TBC1D32Q96NH3 1257 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 ELP3Q9H9T3 547 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 ANO2Q9NQ90 1003 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 CRIM1Q9NZV1 1036 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 KANSL3Q9P2N6 904 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 POLIQ9UNA4 740 aa2.9□□□□□ -1.95
UBXN4-207ENST00000471246 FAM95CA0A1B0GW59 222 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 H3BRB1 525 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 NFIBO00712 420 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 FSCN2O14926 492 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 FAM13AO94988 1023 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 RPLP1P05386 114 aaKnown RBP2.89□□□□□ -1.95
UBXN4-207ENST00000471246 PCSK2P16519 638 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 NPR3P17342 541 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 SERPINB4P48594 390 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 SF3B2Q13435 895 aaKnown RBP2.89□□□□□ -1.95
UBXN4-207ENST00000471246 C8orf34Q49A92 452 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 ALKBH2Q6NS38 261 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 LSRQ86X29 649 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-207ENST00000471246 NCAPG2Q86XI2 1143 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 CACTIN-AS1Q8N1I8 211 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 CRELD1Q96HD1 420 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 SPACA7Q96KW9 195 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 LACRTQ9GZZ8 138 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 RNF208Q9H0X6 261 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 RASSF4Q9H2L5 321 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 CHRDQ9H2X0 955 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 GGNBP2Q9H3C7 697 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 TUT1Q9H6E5 874 aaKnown RBP2.89□□□□□ -1.95
UBXN4-207ENST00000471246 CNTN3Q9P232 1028 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 PRKAG2Q9UGJ0 569 aa2.89□□□□□ -1.95
UBXN4-207ENST00000471246 FZD6O60353 706 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 SMNDC1O75940 238 aaKnown RBP eCLIP2.88□□□□□ -1.95
UBXN4-207ENST00000471246 ADRB1P08588 477 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 ACPPP15309 386 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 CDC25BP30305 580 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 FKBP4Q02790 459 aaKnown RBP eCLIP2.88□□□□□ -1.95
UBXN4-207ENST00000471246 AAMPQ13685 434 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 KCNMB1Q16558 191 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 CEP135Q66GS9 1140 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 FDX2Q6P4F2 183 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 PAOXQ6QHF9 649 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 XKR5Q6UX68 686 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 ADAMTSL4Q6UY14 1074 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 GLYCTKQ8IVS8 523 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 GJD3Q8N144 294 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 STK11IPQ8N1F8 1099 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 CEP120Q8N960 986 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 C1orf127Q8N9H9 656 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 KLHL23Q8NBE8 558 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 TTC16Q8NEE8 873 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 FLAD1Q8NFF5 587 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 SNX29Q8TEQ0 813 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 KLHDC7BQ96G42 594 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 ACSS3Q9H6R3 686 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 CD320Q9NPF0 282 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 EGFL7Q9UHF1 273 aa2.88□□□□□ -1.95
UBXN4-207ENST00000471246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.88□□□□□ -1.95
UBXN4-207ENST00000471246 AKAP8O43823 692 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms