RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CYP4F22Q6NT55 531 aa18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 FBXW7Q969H0 707 aa18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 CAPNS2Q96L46 248 aa18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 GLIS2Q9BZE0 524 aaPredicted RBP18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 TLL2Q9Y6L7 1015 aa18.28■□□□□ 0.52
CDC42SE1-203ENST00000470278 MAST2Q6P0Q8 1798 aa18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 TNRC18O15417 2968 aaPredicted RBP18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 MCAMP43121 646 aa18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 ZNF280AP59817 542 aaPredicted RBP18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 DLK2Q6UY11 383 aa18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.52
CDC42SE1-203ENST00000470278 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 EGFRP00533 1210 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 USP17L8P0C7I0 530 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 NUCB1Q02818 461 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 CHAF1AQ13111 956 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 SCARF1Q14162 830 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 MXD3Q9BW11 206 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 ZBTB47Q9UFB7 747 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 JAG2Q9Y219 1238 aa18.26■□□□□ 0.51
CDC42SE1-203ENST00000470278 SALL3Q9BXA9 1300 aa18.25■□□□□ 0.51
CDC42SE1-203ENST00000470278 AOC2O75106 756 aa18.25■□□□□ 0.51
CDC42SE1-203ENST00000470278 SAPCD2Q86UD0 394 aa18.25■□□□□ 0.51
CDC42SE1-203ENST00000470278 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
CDC42SE1-203ENST00000470278 CNOT7Q9UIV1 285 aaKnown RBP18.25■□□□□ 0.51
CDC42SE1-203ENST00000470278 TTC41PQ6P2S7 1318 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 H7C1D1 291 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 IGSF3O75054 1194 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 ATP5JP18859 108 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 OGFOD1Q8N543 542 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 GPATCH3Q96I76 525 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 ECHDC1Q9NTX5 307 aa18.24■□□□□ 0.51
CDC42SE1-203ENST00000470278 MAST3O60307 1309 aa18.23■□□□□ 0.51
CDC42SE1-203ENST00000470278 ECM29Q5VYK3 1845 aa18.23■□□□□ 0.51
CDC42SE1-203ENST00000470278 PI16Q6UXB8 463 aa18.23■□□□□ 0.51
CDC42SE1-203ENST00000470278 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
CDC42SE1-203ENST00000470278 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
CDC42SE1-203ENST00000470278 MX1P20591 662 aa18.22■□□□□ 0.51
CDC42SE1-203ENST00000470278 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
CDC42SE1-203ENST00000470278 ZIC5Q96T25 663 aa18.22■□□□□ 0.51
CDC42SE1-203ENST00000470278 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
CDC42SE1-203ENST00000470278 CELF2O95319 508 aaKnown RBP18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 PRDX5P30044 214 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 MAP2K1Q02750 393 aaPredicted RBP18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 GRIK5Q16478 980 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 MRIQ9BWK5 157 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 LNPKQ9C0E8 428 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 TSKSQ9UJT2 592 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 SERPINA10Q9UK55 444 aa18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 TTF2Q9UNY4 1162 aaKnown RBP18.21■□□□□ 0.51
CDC42SE1-203ENST00000470278 CYP2E1P05181 493 aaPredicted RBP18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 LDHBP07195 334 aaKnown RBP18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 ZAP70P43403 619 aa18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 KIF4BQ2VIQ3 1234 aa18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 OTUD7AQ8TE49 926 aaPredicted RBP18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 ABHD8Q96I13 439 aa18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 HAUS7Q99871 368 aa18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 BCL11AQ9H165 835 aa18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 AOX1Q06278 1338 aa18.2■□□□□ 0.5
CDC42SE1-203ENST00000470278 ERC2O15083 957 aa18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 TMED8Q6PL24 325 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 SAMD7Q7Z3H4 446 aa18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 ZC3H15Q8WU90 426 aaKnown RBP18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 SNRKQ9NRH2 765 aa18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 ABCF2Q9UG63 623 aa18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 MYO5AQ9Y4I1 1855 aaKnown RBP18.19■□□□□ 0.5
CDC42SE1-203ENST00000470278 F8W031 263 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 GLRX3O76003 335 aaKnown RBP18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 GRM1Q13255 1194 aa18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 TTF1Q15361 905 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 HHIPL2Q6UWX4 724 aa18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 HHIPL1Q96JK4 782 aa18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 ASTN2O75129 1339 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE1-203ENST00000470278 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 ECE1P42892 770 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 PDE1AP54750 535 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 DZIP1Q86YF9 867 aaKnown RBP18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 TEKT1Q969V4 418 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 OSBPL3Q9H4L5 887 aa18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
CDC42SE1-203ENST00000470278 MYH7P12883 1935 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms