RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SPA17Q15506 151 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 AXIN2Q9Y2T1 843 aa15.78■□□□□ 0.12
BRAT1-203ENST00000467558 DLC1Q96QB1 1528 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 RDXP35241 583 aaKnown RBP15.77■□□□□ 0.12
BRAT1-203ENST00000467558 NCOA5Q9HCD5 579 aaKnown RBP15.77■□□□□ 0.12
BRAT1-203ENST00000467558 CYP27B1O15528 508 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 DEXIO95424 95 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 STAT6P42226 847 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 PTH1RQ03431 593 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 PPP2R5BQ15173 497 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 DNAJC25Q9H1X3 360 aa15.77■□□□□ 0.12
BRAT1-203ENST00000467558 E7EWF7 191 aa15.77■□□□□ 0.11
BRAT1-203ENST00000467558 AFMP43652 599 aa15.77■□□□□ 0.11
BRAT1-203ENST00000467558 NBPF14Q5TI25 921 aa15.77■□□□□ 0.11
BRAT1-203ENST00000467558 FAM114A1Q8IWE2 563 aa15.77■□□□□ 0.11
BRAT1-203ENST00000467558 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.11
BRAT1-203ENST00000467558 DBNLQ9UJU6 430 aaKnown RBP15.77■□□□□ 0.11
BRAT1-203ENST00000467558 YEATS4O95619 227 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
BRAT1-203ENST00000467558 RILPL1Q5EBL4 403 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 ERMNQ8TAM6 284 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 PDE8BO95263 885 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
BRAT1-203ENST00000467558 CCDC24Q8N4L8 307 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 UBXN4Q92575 508 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 IQCEQ6IPM2 695 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 ATG3Q9NT62 314 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 ERLIN1O75477 346 aa15.76■□□□□ 0.11
BRAT1-203ENST00000467558 TNNT3P45378 269 aaPredicted RBP15.76■□□□□ 0.11
BRAT1-203ENST00000467558 KIF5CO60282 957 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 SPAG1Q07617 926 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 JDP2Q8WYK2 163 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 GREM2Q9H772 168 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
BRAT1-203ENST00000467558 KRI1Q8N9T8 703 aaKnown RBP15.75■□□□□ 0.11
BRAT1-203ENST00000467558 SEPT11Q9NVA2 429 aaKnown RBP15.75■□□□□ 0.11
BRAT1-203ENST00000467558 STK32BQ9NY57 414 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 PATL2C9JE40 543 aaKnown RBP15.75■□□□□ 0.11
BRAT1-203ENST00000467558 UBASH3AP57075 661 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 CCDC150Q8NCX0 1101 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 ZSWIM6Q9HCJ5 1215 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
BRAT1-203ENST00000467558 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
BRAT1-203ENST00000467558 PRDM1O75626 825 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 RBM10P98175 930 aaKnown RBP15.74■□□□□ 0.11
BRAT1-203ENST00000467558 MAST3O60307 1309 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 N4BP3O15049 544 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 BRD1O95696 1058 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 TTLL12Q14166 644 aaPredicted RBP15.74■□□□□ 0.11
BRAT1-203ENST00000467558 STXBP4Q6ZWJ1 553 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 VPS36Q86VN1 386 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 HSPD1P10809 573 aaKnown RBP15.74■□□□□ 0.11
BRAT1-203ENST00000467558 PDE6AP16499 860 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 POLD1P28340 1107 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 FAM160A1Q05DH4 1040 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 POLA2Q14181 598 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 RRAGBQ5VZM2 374 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 UNC5CLQ8IV45 518 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 TBC1D22AQ8WUA7 517 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 DHX58Q96C10 678 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 TRIM47Q96LD4 638 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 TNNT1P13805 278 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 PIGBQ92521 554 aa15.74■□□□□ 0.11
BRAT1-203ENST00000467558 SEC62Q99442 399 aaKnown RBP15.74■□□□□ 0.11
BRAT1-203ENST00000467558 PARP1P09874 1014 aaKnown RBP15.73■□□□□ 0.11
BRAT1-203ENST00000467558 MATR3P43243 847 aaKnown RBP eCLIP15.73■□□□□ 0.11
BRAT1-203ENST00000467558 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 AOPEPQ8N6M6 819 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 MAP4K1Q92918 833 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 ME3Q16798 604 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 DPP8Q6V1X1 898 aaPredicted RBP15.73■□□□□ 0.11
BRAT1-203ENST00000467558 CTAGE1Q96RT6 745 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
BRAT1-203ENST00000467558 TRMT1Q9NXH9 659 aaKnown RBP15.73■□□□□ 0.11
BRAT1-203ENST00000467558 FAM173BQ6P4H8 233 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 VEZTQ9HBM0 779 aa15.73■□□□□ 0.11
BRAT1-203ENST00000467558 ERVV-1B6SEH8 477 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 PPP4R3AQ6IN85 833 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 GOLGA6L9A6NEM1 432 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 PSMA7O14818 248 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 WDR78Q5VTH9 848 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 ANO1Q5XXA6 986 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 TAF4BQ92750 862 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 GTF3C6Q969F1 213 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 ZNF274Q96GC6 653 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-203ENST00000467558 C16orf45Q96MC5 204 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-203ENST00000467558 LSG1Q9H089 658 aaKnown RBP15.72■□□□□ 0.11
BRAT1-203ENST00000467558 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
BRAT1-203ENST00000467558 SAP30BPQ9UHR5 308 aaKnown RBP15.72■□□□□ 0.11
BRAT1-203ENST00000467558 URI1O94763 535 aaPredicted RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 PTPN12Q05209 780 aaKnown RBP15.71■□□□□ 0.11
BRAT1-203ENST00000467558 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms