RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
PRPF3-202ENST00000467329 AK2P54819 239 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 NAA16Q6N069 864 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-202ENST00000467329 MPNDQ8N594 471 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 CD209Q9NNX6 404 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 IQSEC3Q9UPP2 1182 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-202ENST00000467329 EP400Q96L91 3159 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 FGAP02671 866 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 FBXL16Q8N461 479 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 NSUN4Q96CB9 384 aaKnown RBP11.23□□□□□ -0.61
PRPF3-202ENST00000467329 EYA3Q99504 573 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
PRPF3-202ENST00000467329 ABCF2Q9UG63 623 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 GSTO1P78417 241 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 GIMAP6Q6P9H5 292 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 CERS3Q8IU89 383 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 NACAP1Q9BZK3 213 aa11.23□□□□□ -0.61
PRPF3-202ENST00000467329 E7EWF7 191 aa11.22□□□□□ -0.61
PRPF3-202ENST00000467329 STOX1Q6ZVD7 989 aa11.22□□□□□ -0.61
PRPF3-202ENST00000467329 RTFDC1Q9BY42 306 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-202ENST00000467329 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
PRPF3-202ENST00000467329 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
PRPF3-202ENST00000467329 SNED1Q8TER0 1413 aa11.22□□□□□ -0.61
PRPF3-202ENST00000467329 CHAF1AQ13111 956 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-202ENST00000467329 DPP8Q6V1X1 898 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-202ENST00000467329 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
PRPF3-202ENST00000467329 ZNF622Q969S3 477 aaKnown RBP eCLIP11.22□□□□□ -0.616e-7■■□□□ 13.1
PRPF3-202ENST00000467329 RIOK1Q9BRS2 568 aaKnown RBP11.22□□□□□ -0.61
PRPF3-202ENST00000467329 ARMT1Q9H993 441 aa11.22□□□□□ -0.61
PRPF3-202ENST00000467329 C6orf229H3BNL8 230 aa11.21□□□□□ -0.61
PRPF3-202ENST00000467329 ZNF213O14771 459 aa11.21□□□□□ -0.61
PRPF3-202ENST00000467329 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.61
PRPF3-202ENST00000467329 MECOMQ03112 1051 aa11.21□□□□□ -0.61
PRPF3-202ENST00000467329 LCORLQ8N3X6 602 aa11.21□□□□□ -0.61
PRPF3-202ENST00000467329 AGXT2Q9BYV1 514 aa11.21□□□□□ -0.61
PRPF3-202ENST00000467329 GSG1L2A8MUP6 293 aa11.21□□□□□ -0.62
PRPF3-202ENST00000467329 LDHBP07195 334 aaKnown RBP11.21□□□□□ -0.62
PRPF3-202ENST00000467329 LDHCP07864 332 aa11.21□□□□□ -0.62
PRPF3-202ENST00000467329 SLC51AQ86UW1 340 aa11.21□□□□□ -0.62
PRPF3-202ENST00000467329 IFNL3Q8IZI9 196 aa11.21□□□□□ -0.62
PRPF3-202ENST00000467329 ZNF384Q8TF68 577 aa11.21□□□□□ -0.62
PRPF3-202ENST00000467329 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 NUCB2P80303 420 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 TTLL5Q6EMB2 1281 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
PRPF3-202ENST00000467329 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 C7orf43Q8WVR3 580 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 NAPBQ9H115 298 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-202ENST00000467329 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 CPA1P15085 419 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-202ENST00000467329 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-202ENST00000467329 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 CHMP4CQ96CF2 233 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 ZC3H12CQ9C0D7 883 aaKnown RBP11.2□□□□□ -0.62
PRPF3-202ENST00000467329 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
PRPF3-202ENST00000467329 APPP05067 770 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 NT5C2P49902 561 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 PPP4CP60510 307 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 FKBP1AP62942 108 aaKnown RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 RAB3GAP1Q15042 981 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 NCOA7Q8NI08 942 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 CRNKL1Q9BZJ0 848 aaKnown RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 LAMB1P07942 1786 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 PRDX5P30044 214 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 MIGA1Q8NAN2 632 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-202ENST00000467329 MTA3Q9BTC8 594 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 CNNM2Q9H8M5 875 aa11.19□□□□□ -0.62
PRPF3-202ENST00000467329 CHD4Q14839 1912 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 PDIA4P13667 645 aaKnown RBP11.18□□□□□ -0.62
PRPF3-202ENST00000467329 CHRNA5P30532 468 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 RALYLQ86SE5 291 aaKnown RBP11.18□□□□□ -0.62
PRPF3-202ENST00000467329 STAG1Q8WVM7 1258 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 PDGFDQ9GZP0 370 aaPredicted RBP11.18□□□□□ -0.62
PRPF3-202ENST00000467329 ATP8A2Q9NTI2 1148 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 TPCN1Q9ULQ1 816 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 MCM5P33992 734 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 TDO2P48775 406 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 EVCP57679 992 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 TGFB2P61812 414 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 TRDNQ13061 729 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 Q6ZUG5 572 aa11.18□□□□□ -0.62
PRPF3-202ENST00000467329 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms