RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 USP25Q9UHP3 1055 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 TPCN1Q9ULQ1 816 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 SERPINB2P05120 415 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 UBE4AQ14139 1066 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 TTF1Q15361 905 aaPredicted RBP14.67□□□□□ -0.06
COL4A6-204ENST00000461897 LRRFIP1Q32MZ4 808 aaKnown RBP14.67□□□□□ -0.06
COL4A6-204ENST00000461897 RNF20Q5VTR2 975 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 MTERF4Q7Z6M4 381 aaKnown RBP14.67□□□□□ -0.06
COL4A6-204ENST00000461897 SPATA5Q8NB90 893 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
COL4A6-204ENST00000461897 SPTLC3Q9NUV7 552 aa14.67□□□□□ -0.06
COL4A6-204ENST00000461897 ZNF804BA4D1E1 1349 aa14.66□□□□□ -0.06
COL4A6-204ENST00000461897 POLRMTO00411 1230 aaKnown RBP14.66□□□□□ -0.06
COL4A6-204ENST00000461897 COL9A3Q14050 684 aaPredicted RBP14.66□□□□□ -0.06
COL4A6-204ENST00000461897 ADD2P35612 726 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 KRT85P78386 507 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 COL23A1Q86Y22 540 aaPredicted RBP14.65□□□□□ -0.06
COL4A6-204ENST00000461897 APPBP2Q92624 585 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 DSCC1Q9BVC3 393 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
COL4A6-204ENST00000461897 COL1A1P02452 1464 aaPredicted RBP14.65□□□□□ -0.06
COL4A6-204ENST00000461897 NRXN2Q9P2S2 1712 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 FOXP2O15409 715 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 TPM3P06753 285 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 HSPD1P10809 573 aaKnown RBP14.65□□□□□ -0.06
COL4A6-204ENST00000461897 RPS6KB1P23443 525 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 WASHC4Q2M389 1173 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 CRY2Q49AN0 593 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 SLC51AQ86UW1 340 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
COL4A6-204ENST00000461897 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL4A6-204ENST00000461897 PUS7LQ9H0K6 701 aaKnown RBP14.65□□□□□ -0.06
COL4A6-204ENST00000461897 IDH1O75874 414 aaKnown RBP14.64□□□□□ -0.07
COL4A6-204ENST00000461897 GYG1P46976 350 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 ST5P78524 1137 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 GRAPQ13588 217 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 SLC9C2Q5TAH2 1124 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 LARP1BQ659C4 914 aaKnown RBP14.64□□□□□ -0.07
COL4A6-204ENST00000461897 BLOC1S2Q6QNY1 142 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 GRAPLQ8TC17 118 aaPredicted RBP14.64□□□□□ -0.07
COL4A6-204ENST00000461897 WWC3Q9ULE0 1092 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 ANKRD31Q8N7Z5 1873 aa14.64□□□□□ -0.07
COL4A6-204ENST00000461897 CYP21A2P08686 494 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 CCDC192P0DO97 292 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 KLRK1P26718 216 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 GIMAP6Q6P9H5 292 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 RBM43Q6ZSC3 357 aaKnown RBP14.63□□□□□ -0.07
COL4A6-204ENST00000461897 TTC6Q86TZ1 520 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 LAMA4Q16363 1823 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 TCRBV5S4A2TA0A5A2 114 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 PDE6AP16499 860 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL4A6-204ENST00000461897 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
COL4A6-204ENST00000461897 KRT32Q14532 448 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 NOLC1Q14978 699 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL4A6-204ENST00000461897 UBE3CQ15386 1083 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 ZSCAN25Q6NSZ9 544 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 MYRIPQ8NFW9 859 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 ANKRD2Q9GZV1 360 aa14.63□□□□□ -0.07
COL4A6-204ENST00000461897 SCAND2PQ9GZW5 306 aaPredicted RBP14.63□□□□□ -0.07
COL4A6-204ENST00000461897 PNPLA7Q6ZV29 1317 aa14.62□□□□□ -0.07
COL4A6-204ENST00000461897 MYH13Q9UKX3 1938 aa14.62□□□□□ -0.07
COL4A6-204ENST00000461897 VPS37CA5D8V6 355 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-204ENST00000461897 HMGN5P82970 282 aaKnown RBP14.62□□□□□ -0.07
COL4A6-204ENST00000461897 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
COL4A6-204ENST00000461897 FAM84BQ96KN1 310 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-204ENST00000461897 IQSEC3Q9UPP2 1182 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-204ENST00000461897 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
COL4A6-204ENST00000461897 A0A0G2JLW4 131 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 GPAA1O43292 621 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 FAM200AQ8TCP9 573 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 RPGRQ92834 1020 aaKnown RBP14.61□□□□□ -0.07
COL4A6-204ENST00000461897 IRS2Q9Y4H2 1338 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 CAVIN4Q5BKX8 364 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 FLAD1Q8NFF5 587 aa14.61□□□□□ -0.07
COL4A6-204ENST00000461897 KLRG2A4D1S0 409 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-204ENST00000461897 AP5Z1O43299 807 aa14.6□□□□□ -0.07
COL4A6-204ENST00000461897 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
COL4A6-204ENST00000461897 STOX1Q6ZVD7 989 aa14.6□□□□□ -0.07
COL4A6-204ENST00000461897 FBXO33Q7Z6M2 555 aa14.6□□□□□ -0.07
COL4A6-204ENST00000461897 NLGN1Q8N2Q7 840 aa14.6□□□□□ -0.07
COL4A6-204ENST00000461897 DDX19AQ9NUU7 478 aaKnown RBP14.6□□□□□ -0.07
COL4A6-204ENST00000461897 MAP3K12Q12852 859 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 EZH2Q15910 746 aaKnown RBP14.59□□□□□ -0.07
COL4A6-204ENST00000461897 TTLL5Q6EMB2 1281 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 MAGEB6Q8N7X4 407 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 CAMKK2Q96RR4 588 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 NUP62CLQ9H1M0 184 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 TTC12Q9H892 705 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-204ENST00000461897 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
COL4A6-204ENST00000461897 LRRC37AA6NMS7 1700 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 CACNA1SQ13698 1873 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-204ENST00000461897 EN1Q05925 392 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-204ENST00000461897 TXNRD3Q86VQ6 643 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 VPS37DQ86XT2 251 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 KIAA1524Q8TCG1 905 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
COL4A6-204ENST00000461897 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms