RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 A1BGP04217 495 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 TUBB4AP04350 444 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 MTX1Q13505 466 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
NCL-207ENST00000461347 DHX58Q96C10 678 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 N4BP3O15049 544 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 GPAA1O43292 621 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 YEATS4O95619 227 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 PFKFB1P16118 471 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 TAF6LQ9Y6J9 622 aa16.56■□□□□ 0.24
NCL-207ENST00000461347 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
NCL-207ENST00000461347 STIM1Q13586 685 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 EPHA10Q5JZY3 1008 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 AMOTL1Q8IY63 956 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.242e-18■■■■■ 42.7
NCL-207ENST00000461347 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
NCL-207ENST00000461347 WTAPQ15007 396 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 RTN1Q16799 776 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
NCL-207ENST00000461347 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
NCL-207ENST00000461347 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 CCDC175P0C221 793 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 PNOCQ13519 176 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 KRT40Q6A162 431 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 XAGE2Q96GT9 111 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 GBP3Q9H0R5 595 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 ADD1P35611 737 aaKnown RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 ETF1P62495 437 aaKnown RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 KRI1Q8N9T8 703 aaKnown RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 APPBP2Q92624 585 aa16.54■□□□□ 0.24
NCL-207ENST00000461347 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
NCL-207ENST00000461347 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 RAD21O60216 631 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 ZAP70P43403 619 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 TRMT44Q8IYL2 757 aaKnown RBP16.53■□□□□ 0.24
NCL-207ENST00000461347 ZNF710Q8N1W2 664 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 NFE2L3Q9Y4A8 694 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 C3P01024 1663 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 CHGBP05060 677 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
NCL-207ENST00000461347 KANK3Q6NY19 840 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 GOLGA1Q92805 767 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
NCL-207ENST00000461347 AP5Z1O43299 807 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 CCDC148Q8NFR7 591 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
NCL-207ENST00000461347 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.24
NCL-207ENST00000461347 UBR1Q8IWV7 1749 aa16.52■□□□□ 0.24
NCL-207ENST00000461347 PHACTR2O75167 634 aa16.52■□□□□ 0.24
NCL-207ENST00000461347 CDC25BP30305 580 aa16.52■□□□□ 0.24
NCL-207ENST00000461347 CRACR2AQ9BSW2 395 aa16.52■□□□□ 0.24
NCL-207ENST00000461347 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.23
NCL-207ENST00000461347 PPP2R3AQ06190 1150 aa16.52■□□□□ 0.23
NCL-207ENST00000461347 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.23
NCL-207ENST00000461347 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.23
NCL-207ENST00000461347 GJB4Q9NTQ9 266 aa16.52■□□□□ 0.23
NCL-207ENST00000461347 SLC5A1P13866 664 aa16.52■□□□□ 0.23
NCL-207ENST00000461347 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
NCL-207ENST00000461347 FGAP02671 866 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 RHOXF2BP0C7M4 288 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
NCL-207ENST00000461347 ZNF569Q5MCW4 686 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 FBXO38Q6PIJ6 1188 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 TTLL7Q6ZT98 887 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 RHOXF2Q9BQY4 288 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 ARHGAP6O43182 974 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
NCL-207ENST00000461347 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
NCL-207ENST00000461347 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
NCL-207ENST00000461347 PPP1R13BQ96KQ4 1090 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 CLIC6Q96NY7 704 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
NCL-207ENST00000461347 ADKP55263 362 aaKnown RBP16.5■□□□□ 0.23
NCL-207ENST00000461347 CCDC181Q5TID7 509 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 TXLNBQ8N3L3 684 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 GOLPH3LQ9H4A5 285 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 FER1L4A9Z1Z3 1794 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 NLRP5P59047 1200 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 DIS3L2Q8IYB7 885 aaKnown RBP16.5■□□□□ 0.23
NCL-207ENST00000461347 FANCLQ9NW38 375 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 TRIM75PA6NK02 468 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 H0YHG0 523 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 LINC00301Q8NCQ3 95 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 SLC4A4Q9Y6R1 1079 aa16.5■□□□□ 0.23
NCL-207ENST00000461347 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms