RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 OGFOD1Q8N543 542 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
COL18A1-206ENST00000459895 ZBED3Q96IU2 234 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-206ENST00000459895 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 OTOFQ9HC10 1997 aa15.69■□□□□ 0.1
COL18A1-206ENST00000459895 CYP2E1P05181 493 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-206ENST00000459895 CRKP46108 304 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 DIXDC1Q155Q3 683 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 NBPF9Q3BBW0 867 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 SMC1BQ8NDV3 1235 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 PIH1D3Q9NQM4 214 aaKnown RBP15.68■□□□□ 0.1
COL18A1-206ENST00000459895 ABCF2Q9UG63 623 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 SUGT1Q9Y2Z0 365 aa15.68■□□□□ 0.1
COL18A1-206ENST00000459895 POLR2AP24928 1970 aaKnown RBP15.67■□□□□ 0.1
COL18A1-206ENST00000459895 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 WNT10BO00744 389 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 LDHBP07195 334 aaKnown RBP15.67■□□□□ 0.1
COL18A1-206ENST00000459895 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 MAP1SQ66K74 1059 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-206ENST00000459895 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 DZIP1Q86YF9 867 aaKnown RBP15.67■□□□□ 0.1
COL18A1-206ENST00000459895 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
COL18A1-206ENST00000459895 ZNF384Q8TF68 577 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 DNAJC2Q99543 621 aaKnown RBP15.67■□□□□ 0.1
COL18A1-206ENST00000459895 LNPKQ9C0E8 428 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 SERPINA10Q9UK55 444 aa15.67■□□□□ 0.1
COL18A1-206ENST00000459895 NUCB1Q02818 461 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 ANGEL2Q5VTE6 544 aaKnown RBP15.66■□□□□ 0.1
COL18A1-206ENST00000459895 MTMR14Q8NCE2 650 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL18A1-206ENST00000459895 TEKT1Q969V4 418 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 EDC3Q96F86 508 aaKnown RBP15.66■□□□□ 0.1
COL18A1-206ENST00000459895 ANTXR1Q9H6X2 564 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 ECHDC1Q9NTX5 307 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 DAGLAQ9Y4D2 1042 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 SSC5DA1L4H1 1573 aa15.66■□□□□ 0.1
COL18A1-206ENST00000459895 ADM5C9JUS6 153 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 ATP5JP18859 108 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 MX1P20591 662 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 RBM5P52756 815 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL18A1-206ENST00000459895 MECOMQ03112 1051 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 CHD1LQ86WJ1 897 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 GPATCH3Q96I76 525 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 GLIS2Q9BZE0 524 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-206ENST00000459895 SCAF8Q9UPN6 1271 aaKnown RBP15.65■□□□□ 0.1
COL18A1-206ENST00000459895 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 GAKO14976 1311 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 TTC41PQ6P2S7 1318 aa15.65■□□□□ 0.1
COL18A1-206ENST00000459895 SIPA1L1O43166 1804 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 CLRN2A0PK11 232 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 GOLIM4O00461 696 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 MMP14P50281 582 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 PI4K2BQ8TCG2 481 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 NSUN4Q96CB9 384 aaKnown RBP15.64■□□□□ 0.09
COL18A1-206ENST00000459895 HAUS7Q99871 368 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 BOLA2Q9H3K6 86 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-206ENST00000459895 PGAP2Q9UHJ9 254 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 PITPNM2Q9BZ72 1349 aa15.64■□□□□ 0.09
COL18A1-206ENST00000459895 TRAF5O00463 557 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 HDLBPQ00341 1268 aaKnown RBP15.63■□□□□ 0.09
COL18A1-206ENST00000459895 FSTL1Q12841 308 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 SPTY2D1Q68D10 685 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-206ENST00000459895 ZC3H15Q8WU90 426 aaKnown RBP15.63■□□□□ 0.09
COL18A1-206ENST00000459895 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-206ENST00000459895 ZDHHC15Q96MV8 337 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 PAG1Q9NWQ8 432 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 RAI14Q9P0K7 980 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 LRP2BPQ9P2M1 347 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 PASKQ96RG2 1323 aa15.63■□□□□ 0.09
COL18A1-206ENST00000459895 LAMB1P07942 1786 aa15.62■□□□□ 0.09
COL18A1-206ENST00000459895 IDH1O75874 414 aaKnown RBP15.62■□□□□ 0.09
COL18A1-206ENST00000459895 FMR1Q06787 632 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL18A1-206ENST00000459895 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
COL18A1-206ENST00000459895 HHIPL2Q6UWX4 724 aa15.62■□□□□ 0.09
COL18A1-206ENST00000459895 DLK2Q6UY11 383 aa15.62■□□□□ 0.09
COL18A1-206ENST00000459895 ADGRA1Q86SQ6 560 aa15.62■□□□□ 0.09
COL18A1-206ENST00000459895 ITGBL1O95965 494 aaPredicted RBP15.61■□□□□ 0.09
COL18A1-206ENST00000459895 PDE4AP27815 886 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 CACNB3P54284 484 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 APOBEC3HQ6NTF7 200 aaKnown RBP15.61■□□□□ 0.09
COL18A1-206ENST00000459895 KRT26Q7Z3Y9 468 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 APOBEC3FQ8IUX4 373 aaKnown RBP15.61■□□□□ 0.09
COL18A1-206ENST00000459895 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 DCPSQ96C86 337 aaKnown RBP15.61■□□□□ 0.09
COL18A1-206ENST00000459895 TDRD3Q9H7E2 651 aaKnown RBP15.61■□□□□ 0.09
COL18A1-206ENST00000459895 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 CNTNAP1P78357 1384 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
COL18A1-206ENST00000459895 BTDP43251 543 aa15.6■□□□□ 0.09
COL18A1-206ENST00000459895 PDE1AP54750 535 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms