RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ATP6V0A2Q9Y487 856 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 ANKRD36CQ5JPF3 1778 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 LTBP1Q14766 1721 aa6.1□□□□□ -1.43
GTF3C3-208ENST00000455546 SNED1Q8TER0 1413 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 ABCC4O15439 1325 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 TMEM88BA6NKF7 163 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 BBOX1O75936 387 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 VEGFBP49765 207 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 SCNN1DP51172 638 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 CXCL9Q07325 125 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 VAC14Q08AM6 782 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 HSP90AB3PQ58FF7 597 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 DDX46Q7L014 1031 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 SP8Q8IXZ3 490 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 NIM1KQ8IY84 436 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 TNS4Q8IZW8 715 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 MPNDQ8N594 471 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 PLBD2Q8NHP8 589 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 SPSB2Q99619 263 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 MTRQ99707 1265 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 TMX4Q9H1E5 349 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 PHAXQ9H814 394 aaKnown RBP6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 PCNTO95613 3336 aa6.09□□□□□ -1.43
GTF3C3-208ENST00000455546 IBTKQ9P2D0 1353 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 SH3TC1Q8TE82 1336 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 TRAF5O00463 557 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 RAD17O75943 681 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 JUNDP17535 347 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 LMOD1P29536 600 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 CTHP32929 405 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 GRM1Q13255 1194 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 DEFB115Q30KQ5 88 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 DLK2Q6UY11 383 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 DPP8Q6V1X1 898 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 PNMA8AQ86V59 439 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 WWC1Q8IX03 1113 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 HOMEZQ8IX15 550 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 FAM160A2Q8N612 972 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 C8orf58Q8NAV2 365 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 ZNF516Q92618 1163 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 CELF1Q92879 486 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 GPR101Q96P66 508 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 ISCA1Q9BUE6 129 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 DBF4Q9UBU7 674 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 TRPM7Q96QT4 1865 aa6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 DDX60Q8IY21 1712 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-208ENST00000455546 COL4A1P02462 1669 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 YDJCA8MPS7 323 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 FOXN1O15353 648 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 ZNF853P0CG23 659 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 GMPSP49915 693 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 GRAPQ13588 217 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 CST9Q5W186 159 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 LYPD8Q6UX82 237 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 TSPYL6Q8N831 410 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 GRAPLQ8TC17 118 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 CCDC85AQ96PX6 553 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 MYD88Q99836 296 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 BCL2L13Q9BXK5 485 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 RTFDC1Q9BY42 306 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 SEC31BQ9NQW1 1179 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 PLSCR2Q9NRY7 297 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 HYPKQ9NX55 129 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 GPRC5DQ9NZD1 345 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 POLLQ9UGP5 575 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 ZNRF3Q9ULT6 936 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 ABT1Q9ULW3 272 aaKnown RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 NSFL1CQ9UNZ2 370 aaKnown RBP6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 ADAMTSL1Q8N6G6 1762 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 RIC1Q4ADV7 1423 aa6.07□□□□□ -1.44
GTF3C3-208ENST00000455546 CNTNAP1P78357 1384 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 WDR33Q9C0J8 1336 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 CASP8AP2Q9UKL3 1982 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 IRS4O14654 1257 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 GNAI1P63096 354 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 GPSM2P81274 684 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 KIAA2012Q0VF49 1180 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 SF3B3Q15393 1217 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 DESI1Q6ICB0 168 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 USP50Q70EL3 339 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 SUPT20HQ8NEM7 779 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 NKX2-3Q8TAU0 364 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 GLMNQ92990 594 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 TSR2Q969E8 191 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 CCDC97Q96F63 343 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 GLIS2Q9BZE0 524 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 VPS33BQ9H267 617 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 DBNDD1Q9H9R9 158 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 CNOT7Q9UIV1 285 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 SALL2Q9Y467 1007 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 SCN9AQ15858 1988 aa6.06□□□□□ -1.44
GTF3C3-208ENST00000455546 WTIPA6NIX2 430 aaPredicted RBP6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 RASSF10A6NK89 507 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 PSMD14O00487 310 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 ADH1BP00325 375 aa6.05□□□□□ -1.44
GTF3C3-208ENST00000455546 F12P00748 615 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms