RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ARHGEF6Q15052 776 aa21.96■■□□□ 1.11
UBE2D4-209ENST00000454428 LINS1Q8NG48 757 aa21.96■■□□□ 1.11
UBE2D4-209ENST00000454428 DNAAF4Q8WXU2 420 aa21.96■■□□□ 1.11
UBE2D4-209ENST00000454428 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
UBE2D4-209ENST00000454428 SERPINA10Q9UK55 444 aa21.96■■□□□ 1.11
UBE2D4-209ENST00000454428 LACTBP83111 547 aaPredicted RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 IFIT5Q13325 482 aaKnown RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 TWISTNBQ3B726 338 aaPredicted RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 CHRDL2Q6WN34 429 aa21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 DZIP1LQ8IYY4 767 aaKnown RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 TDRD7Q8NHU6 1098 aaKnown RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 ZNF594Q96JF6 807 aaPredicted RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 TTF2Q9UNY4 1162 aaKnown RBP21.95■■□□□ 1.1
UBE2D4-209ENST00000454428 TCP10L2B9ZVM9 353 aa21.94■■□□□ 1.1
UBE2D4-209ENST00000454428 TLR2O60603 784 aa21.94■■□□□ 1.1
UBE2D4-209ENST00000454428 GRIK5Q16478 980 aa21.94■■□□□ 1.1
UBE2D4-209ENST00000454428 EPHA10Q5JZY3 1008 aa21.94■■□□□ 1.1
UBE2D4-209ENST00000454428 MFSD14BQ5SR56 506 aa21.94■■□□□ 1.1
UBE2D4-209ENST00000454428 RBM27Q9P2N5 1060 aaKnown RBP21.94■■□□□ 1.1
UBE2D4-209ENST00000454428 SPDYE5A6NIY4 337 aa21.93■■□□□ 1.1
UBE2D4-209ENST00000454428 CTGFP29279 349 aa21.93■■□□□ 1.1
UBE2D4-209ENST00000454428 SNCAIPQ9Y6H5 919 aa21.93■■□□□ 1.1
UBE2D4-209ENST00000454428 BTBD19C9JJ37 291 aa21.92■■□□□ 1.1
UBE2D4-209ENST00000454428 MTFR1Q15390 333 aa21.92■■□□□ 1.1
UBE2D4-209ENST00000454428 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
UBE2D4-209ENST00000454428 CACNA1FO60840 1977 aa21.92■■□□□ 1.1
UBE2D4-209ENST00000454428 PLIN1O60240 522 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 CRKP46108 304 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 GYG1P46976 350 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 UBE2Q1Q7Z7E8 422 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 PRO3102Q9H379 93 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 CSADQ9Y600 493 aa21.91■■□□□ 1.1
UBE2D4-209ENST00000454428 FAM84BQ96KN1 310 aaPredicted RBP21.9■■□□□ 1.1
UBE2D4-209ENST00000454428 ZCCHC17Q9NP64 241 aaKnown RBP21.9■■□□□ 1.1
UBE2D4-209ENST00000454428 CHMP3Q9Y3E7 222 aa21.9■■□□□ 1.1
UBE2D4-209ENST00000454428 IRF6O14896 467 aa21.89■■□□□ 1.09
UBE2D4-209ENST00000454428 CETPP11597 493 aa21.89■■□□□ 1.09
UBE2D4-209ENST00000454428 LDHAL6AQ6ZMR3 332 aa21.89■■□□□ 1.09
UBE2D4-209ENST00000454428 GNRH1P01148 92 aa21.88■■□□□ 1.09
UBE2D4-209ENST00000454428 CACNB3P54284 484 aa21.88■■□□□ 1.09
UBE2D4-209ENST00000454428 BEND3Q5T5X7 828 aa21.88■■□□□ 1.09
UBE2D4-209ENST00000454428 C17orf99Q6UX52 265 aa21.88■■□□□ 1.09
UBE2D4-209ENST00000454428 ERO1BQ86YB8 467 aa21.88■■□□□ 1.09
UBE2D4-209ENST00000454428 ZKSCAN4Q969J2 545 aaPredicted RBP21.88■■□□□ 1.09
UBE2D4-209ENST00000454428 F6X3S4 739 aa21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 ECM2O94769 699 aaPredicted RBP21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 HIBADHP31937 336 aaKnown RBP21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 KIF22Q14807 665 aa21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 WWC1Q8IX03 1113 aa21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 TRIM47Q96LD4 638 aa21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 CNNM1Q9NRU3 951 aa21.87■■□□□ 1.09
UBE2D4-209ENST00000454428 ADGRA2Q96PE1 1338 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 TNNI2P48788 182 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 PRMT2P55345 433 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 SNAPC2Q13487 334 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 UBE4AQ14139 1066 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 CCDC57Q2TAC2 916 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 WRNIP1Q96S55 665 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 SRRDQ9UH36 339 aa21.86■■□□□ 1.09
UBE2D4-209ENST00000454428 PPIL2Q13356 520 aa21.85■■□□□ 1.09
UBE2D4-209ENST00000454428 DPF3Q92784 378 aa21.85■■□□□ 1.09
UBE2D4-209ENST00000454428 PUS3Q9BZE2 481 aaKnown RBP21.85■■□□□ 1.09
UBE2D4-209ENST00000454428 CPA4Q9UI42 421 aa21.85■■□□□ 1.09
UBE2D4-209ENST00000454428 VAMP4O75379 141 aa21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 WDHD1O75717 1129 aaPredicted RBP21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 OSBPP22059 807 aa21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 PSMC4P43686 418 aa21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 GJA8P48165 433 aa21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 HDLBPQ00341 1268 aaKnown RBP21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 IQSEC3Q9UPP2 1182 aaPredicted RBP21.83■■□□□ 1.09
UBE2D4-209ENST00000454428 MOGSQ13724 837 aa21.82■■□□□ 1.08
UBE2D4-209ENST00000454428 TAF7LQ5H9L4 462 aa21.82■■□□□ 1.08
UBE2D4-209ENST00000454428 RIPOR2Q9Y4F9 1068 aa21.82■■□□□ 1.08
UBE2D4-209ENST00000454428 IL16Q14005 1332 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 FANCIQ9NVI1 1328 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 GRM8O00222 908 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 GJB1P08034 283 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 CCL5P13501 91 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 GRK4P32298 578 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 APOBEC3HQ6NTF7 200 aaKnown RBP21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 FAM83AQ86UY5 434 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 KAZALD1Q96I82 304 aa21.81■■□□□ 1.08
UBE2D4-209ENST00000454428 MGAMO43451 1857 aa21.8■■□□□ 1.08
UBE2D4-209ENST00000454428 INPP5BP32019 993 aa21.8■■□□□ 1.08
UBE2D4-209ENST00000454428 PPATQ06203 517 aa21.8■■□□□ 1.08
UBE2D4-209ENST00000454428 ANKRD23Q86SG2 305 aa21.8■■□□□ 1.08
UBE2D4-209ENST00000454428 NKX2-3Q8TAU0 364 aa21.8■■□□□ 1.08
UBE2D4-209ENST00000454428 ZDHHC15Q96MV8 337 aa21.8■■□□□ 1.08
UBE2D4-209ENST00000454428 RPAP1Q9BWH6 1393 aaPredicted RBP21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 PDHXO00330 501 aa21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 DLL1O00548 723 aa21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 CHAF1AQ13111 956 aaPredicted RBP21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 FKBP1CQ5VVH2 108 aa21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 MIGA2Q7L4E1 593 aa21.79■■□□□ 1.08
UBE2D4-209ENST00000454428 TEKT1Q969V4 418 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms