RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SLC51AQ86UW1 340 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 KCNB2Q92953 911 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
RFC4-210ENST00000449502 UPF3BQ9BZI7 483 aaKnown RBP11.53□□□□□ -0.56
RFC4-210ENST00000449502 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 NAPBQ9H115 298 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 ARMT1Q9H993 441 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 SPEF2Q9C093 1822 aa11.53□□□□□ -0.56
RFC4-210ENST00000449502 TDO2P48775 406 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 GTF2IP78347 998 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 MECOMQ03112 1051 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 TRDNQ13061 729 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.57
RFC4-210ENST00000449502 MFSD14BQ5SR56 506 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 EP400Q96L91 3159 aa11.52□□□□□ -0.57
RFC4-210ENST00000449502 RPAP1Q9BWH6 1393 aaPredicted RBP11.52□□□□□ -0.57
RFC4-210ENST00000449502 PPIP5K2O43314 1243 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 FGAP02671 866 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 PRDX5P30044 214 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 TTLL5Q6EMB2 1281 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 RUFY3Q7L099 469 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
RFC4-210ENST00000449502 CERS3Q8IU89 383 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 NSUN4Q96CB9 384 aaKnown RBP11.51□□□□□ -0.57
RFC4-210ENST00000449502 RTFDC1Q9BY42 306 aaPredicted RBP11.51□□□□□ -0.57
RFC4-210ENST00000449502 CRNKL1Q9BZJ0 848 aaKnown RBP11.51□□□□□ -0.57
RFC4-210ENST00000449502 ZSWIM6Q9HCJ5 1215 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 SUGT1Q9Y2Z0 365 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 NRXN2Q9P2S2 1712 aa11.51□□□□□ -0.57
RFC4-210ENST00000449502 CYP21A2P08686 494 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 ALX1Q15699 326 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 NOL8Q76FK4 1167 aaKnown RBP11.5□□□□□ -0.57
RFC4-210ENST00000449502 AMOTL1Q8IY63 956 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 LCORLQ8N3X6 602 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 C7orf43Q8WVR3 580 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 DBNDD1Q9H9R9 158 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 TUBGCP6Q96RT7 1819 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 FAM205AQ6ZU69 1335 aa11.5□□□□□ -0.57
RFC4-210ENST00000449502 COL1A1P02452 1464 aaPredicted RBP11.5□□□□□ -0.57
RFC4-210ENST00000449502 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 ECE2O60344 883 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 PLCG2P16885 1265 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 USP5P45974 858 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 HAND2P61296 217 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 ADCK5Q3MIX3 580 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 AATFQ9NY61 560 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFC4-210ENST00000449502 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
RFC4-210ENST00000449502 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
RFC4-210ENST00000449502 KCNA3P22001 575 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
RFC4-210ENST00000449502 KIAA2012Q0VF49 1180 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 AOC3Q16853 763 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
RFC4-210ENST00000449502 PSMD1Q99460 953 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 VPS33BQ9H267 617 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 SLKQ9H2G2 1235 aaPredicted RBP11.48□□□□□ -0.57
RFC4-210ENST00000449502 RNF41Q9H4P4 317 aaPredicted RBP11.48□□□□□ -0.57
RFC4-210ENST00000449502 LIMCH1Q9UPQ0 1083 aa11.48□□□□□ -0.57
RFC4-210ENST00000449502 MROH7-TTC4A0A0A0MT08 1334 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 ZMYM6O95789 1325 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 E7EWF7 191 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 F8W031 263 aaPredicted RBP11.47□□□□□ -0.57
RFC4-210ENST00000449502 PRKAB2O43741 272 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 CD2BP2O95400 341 aaKnown RBP11.47□□□□□ -0.57
RFC4-210ENST00000449502 AK2P54819 239 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 GIMAP6Q6P9H5 292 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
RFC4-210ENST00000449502 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 NIM1KQ8IY84 436 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 TMX3Q96JJ7 454 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 RIOK1Q9BRS2 568 aaKnown RBP11.47□□□□□ -0.57
RFC4-210ENST00000449502 TOMM22Q9NS69 142 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 ATP8A2Q9NTI2 1148 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 TTF2Q9UNY4 1162 aaKnown RBP11.47□□□□□ -0.57
RFC4-210ENST00000449502 BCS1LQ9Y276 419 aa11.47□□□□□ -0.57
RFC4-210ENST00000449502 GSG1L2A8MUP6 293 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 CPA1P15085 419 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 BTDP43251 543 aa11.46□□□□□ -0.57
RFC4-210ENST00000449502 FKBP1AP62942 108 aaKnown RBP11.46□□□□□ -0.57
RFC4-210ENST00000449502 DIXDC1Q155Q3 683 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms