RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 TCP10L2B9ZVM9 353 aa22.83■■□□□ 1.25
GTF3A-204ENST00000438571 PDE8BO95263 885 aa22.83■■□□□ 1.25
GTF3A-204ENST00000438571 RFX5P48382 616 aaPredicted RBP22.83■■□□□ 1.25
GTF3A-204ENST00000438571 BCAMP50895 628 aa22.83■■□□□ 1.25
GTF3A-204ENST00000438571 SUPT20HL1Q3ZLR7 823 aa22.83■■□□□ 1.25
GTF3A-204ENST00000438571 IFNL1Q8IU54 200 aa22.83■■□□□ 1.25
GTF3A-204ENST00000438571 MANSC4A6NHS7 340 aaPredicted RBP22.82■■□□□ 1.24
GTF3A-204ENST00000438571 ZBTB48P10074 688 aaPredicted RBP22.82■■□□□ 1.24
GTF3A-204ENST00000438571 CACNB3P54284 484 aa22.82■■□□□ 1.24
GTF3A-204ENST00000438571 TMEM39BQ9GZU3 492 aa22.82■■□□□ 1.24
GTF3A-204ENST00000438571 MYH2Q9UKX2 1941 aa22.82■■□□□ 1.24
GTF3A-204ENST00000438571 HTTP42858 3142 aa22.81■■□□□ 1.24
GTF3A-204ENST00000438571 FKTNO75072 461 aa22.81■■□□□ 1.24
GTF3A-204ENST00000438571 FGFR2P21802 821 aa22.81■■□□□ 1.24
GTF3A-204ENST00000438571 IREB2P48200 963 aaKnown RBP22.81■■□□□ 1.24
GTF3A-204ENST00000438571 NOM1Q5C9Z4 860 aaKnown RBP22.81■■□□□ 1.24
GTF3A-204ENST00000438571 VPS37DQ86XT2 251 aa22.81■■□□□ 1.24
GTF3A-204ENST00000438571 SMC4Q9NTJ3 1288 aa22.81■■□□□ 1.24
GTF3A-204ENST00000438571 CNKSR2Q8WXI2 1034 aa22.8■■□□□ 1.24
GTF3A-204ENST00000438571 ELP3Q9H9T3 547 aa22.8■■□□□ 1.24
GTF3A-204ENST00000438571 RBBP6Q7Z6E9 1792 aaKnown RBP22.8■■□□□ 1.24
GTF3A-204ENST00000438571 TNFAIP1Q13829 316 aa22.79■■□□□ 1.24
GTF3A-204ENST00000438571 ALDH1L2Q3SY69 923 aa22.79■■□□□ 1.24
GTF3A-204ENST00000438571 CAVIN4Q5BKX8 364 aa22.79■■□□□ 1.24
GTF3A-204ENST00000438571 ANKRD13AQ8IZ07 590 aa22.79■■□□□ 1.24
GTF3A-204ENST00000438571 DOCK2Q92608 1830 aa22.78■■□□□ 1.24
GTF3A-204ENST00000438571 FRAT2O75474 233 aaPredicted RBP22.78■■□□□ 1.24
GTF3A-204ENST00000438571 TRMT2AQ8IZ69 625 aaKnown RBP22.78■■□□□ 1.24
GTF3A-204ENST00000438571 PTPN18Q99952 460 aa22.78■■□□□ 1.24
GTF3A-204ENST00000438571 EYA2O00167 538 aa22.77■■□□□ 1.24
GTF3A-204ENST00000438571 PUM3Q15397 648 aaKnown RBP22.77■■□□□ 1.24
GTF3A-204ENST00000438571 PKN2Q16513 984 aaKnown RBP22.77■■□□□ 1.24
GTF3A-204ENST00000438571 FBXO46Q6PJ61 603 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-204ENST00000438571 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-204ENST00000438571 ATG9AQ7Z3C6 839 aa22.77■■□□□ 1.24
GTF3A-204ENST00000438571 OPTNQ96CV9 577 aa22.77■■□□□ 1.24
GTF3A-204ENST00000438571 CENPFP49454 3210 aa22.77■■□□□ 1.24
GTF3A-204ENST00000438571 ALDH1A1P00352 501 aa22.76■■□□□ 1.23
GTF3A-204ENST00000438571 CAP1Q01518 475 aa22.76■■□□□ 1.23
GTF3A-204ENST00000438571 TBC1D22AQ8WUA7 517 aa22.76■■□□□ 1.23
GTF3A-204ENST00000438571 UNCXA6NJT0 531 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 IFIT1P09914 478 aaKnown RBP22.75■■□□□ 1.23
GTF3A-204ENST00000438571 INHBEP58166 350 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 CRHR2Q13324 411 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 VGLL4Q14135 290 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.75■■□□□ 1.23
GTF3A-204ENST00000438571 TEKT1Q969V4 418 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 SIL1Q9H173 461 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 KIF16BQ96L93 1317 aa22.75■■□□□ 1.23
GTF3A-204ENST00000438571 HDLBPQ00341 1268 aaKnown RBP22.74■■□□□ 1.23
GTF3A-204ENST00000438571 NOB1Q9ULX3 412 aaKnown RBP22.74■■□□□ 1.23
GTF3A-204ENST00000438571 TRIM17Q9Y577 477 aa22.74■■□□□ 1.23
GTF3A-204ENST00000438571 TESPA1A2RU30 521 aaPredicted RBP22.73■■□□□ 1.23
GTF3A-204ENST00000438571 TNNI2P48788 182 aa22.73■■□□□ 1.23
GTF3A-204ENST00000438571 APOBEC3HQ6NTF7 200 aaKnown RBP22.73■■□□□ 1.23
GTF3A-204ENST00000438571 OTOP1Q7RTM1 612 aa22.73■■□□□ 1.23
GTF3A-204ENST00000438571 CD99L2Q8TCZ2 262 aa22.73■■□□□ 1.23
GTF3A-204ENST00000438571 MS4A4AQ96JQ5 239 aa22.73■■□□□ 1.23
GTF3A-204ENST00000438571 ZDHHC15Q96MV8 337 aa22.73■■□□□ 1.23
GTF3A-204ENST00000438571 UBTFL1P0CB47 393 aaPredicted RBP22.72■■□□□ 1.23
GTF3A-204ENST00000438571 SLC5A1P13866 664 aa22.72■■□□□ 1.23
GTF3A-204ENST00000438571 BRI3BPQ8WY22 251 aa22.72■■□□□ 1.23
GTF3A-204ENST00000438571 PA2G4Q9UQ80 394 aaKnown RBP22.72■■□□□ 1.23
GTF3A-204ENST00000438571 LPIN2Q92539 896 aa22.71■■□□□ 1.23
GTF3A-204ENST00000438571 OTUD5Q96G74 571 aa22.71■■□□□ 1.23
GTF3A-204ENST00000438571 LRRFIP2Q9Y608 721 aaKnown RBP22.71■■□□□ 1.23
GTF3A-204ENST00000438571 SNCAIPQ9Y6H5 919 aa22.71■■□□□ 1.23
GTF3A-204ENST00000438571 KIAA0100Q14667 2235 aaKnown RBP22.71■■□□□ 1.23
GTF3A-204ENST00000438571 BRCA2P51587 3418 aa22.71■■□□□ 1.23
GTF3A-204ENST00000438571 PTPRFP10586 1907 aa22.7■■□□□ 1.23
GTF3A-204ENST00000438571 MAP3K9P80192 1104 aa22.7■■□□□ 1.22
GTF3A-204ENST00000438571 MEIS3Q99687 375 aa22.7■■□□□ 1.22
GTF3A-204ENST00000438571 MAST3O60307 1309 aa22.69■■□□□ 1.22
GTF3A-204ENST00000438571 PRDX5P30044 214 aa22.69■■□□□ 1.22
GTF3A-204ENST00000438571 DIXDC1Q155Q3 683 aa22.69■■□□□ 1.22
GTF3A-204ENST00000438571 RPAP1Q9BWH6 1393 aaPredicted RBP22.68■■□□□ 1.22
GTF3A-204ENST00000438571 CCL15-CCL14A0A0B4J2E2 113 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 SLC34A2O95436 690 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 CCL15Q16663 113 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 ATP2B3Q16720 1220 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 FAM43AQ8N2R8 423 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 ZKSCAN4Q969J2 545 aaPredicted RBP22.68■■□□□ 1.22
GTF3A-204ENST00000438571 WRNIP1Q96S55 665 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 TMOD2Q9NZR1 351 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 DAGLAQ9Y4D2 1042 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 PHIPQ8WWQ0 1821 aa22.68■■□□□ 1.22
GTF3A-204ENST00000438571 MYO5AQ9Y4I1 1855 aaKnown RBP22.67■■□□□ 1.22
GTF3A-204ENST00000438571 ADORA1P30542 326 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 PHKA1P46020 1223 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 OTUD7BQ6GQQ9 843 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 HHIPL2Q6UWX4 724 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 FAM83AQ86UY5 434 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 MRIQ9BWK5 157 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 SUGT1Q9Y2Z0 365 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 CSADQ9Y600 493 aa22.67■■□□□ 1.22
GTF3A-204ENST00000438571 MGAMO43451 1857 aa22.66■■□□□ 1.22
GTF3A-204ENST00000438571 MKI67P46013 3256 aaKnown RBP22.66■■□□□ 1.22
GTF3A-204ENST00000438571 SPDYE5A6NIY4 337 aa22.66■■□□□ 1.22
GTF3A-204ENST00000438571 CIAO1O76071 339 aa22.66■■□□□ 1.22
GTF3A-204ENST00000438571 WDR66Q8TBY9 1149 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms