RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 ZMYM1Q5SVZ6 1142 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 KIAA1468Q9P260 1216 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
DDX56-205ENST00000433257 ARFGEF2Q9Y6D5 1785 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 TNS1Q9HBL0 1735 aaKnown RBP17.12■□□□□ 0.33
DDX56-205ENST00000433257 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 ZFYP08048 801 aaPredicted RBP17.12■□□□□ 0.33
DDX56-205ENST00000433257 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
DDX56-205ENST00000433257 STK38Q15208 465 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 TXNRD1Q16881 649 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 AOPEPQ8N6M6 819 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 DNAJC2Q99543 621 aaKnown RBP17.12■□□□□ 0.33
DDX56-205ENST00000433257 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
DDX56-205ENST00000433257 ITGB4P16144 1822 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 GOLGA6L9A6NEM1 432 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
DDX56-205ENST00000433257 IL15P40933 162 aaPredicted RBP17.11■□□□□ 0.33
DDX56-205ENST00000433257 NLRP12P59046 1061 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 ZNF215Q9UL58 517 aaPredicted RBP17.11■□□□□ 0.33
DDX56-205ENST00000433257 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 PHLPP2Q6ZVD8 1323 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 BTAF1O14981 1849 aa17.11■□□□□ 0.33
DDX56-205ENST00000433257 E7EWF7 191 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
DDX56-205ENST00000433257 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 NOL10Q9BSC4 688 aaKnown RBP17.1■□□□□ 0.33
DDX56-205ENST00000433257 CTDNEP1O95476 244 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 PROM2Q8N271 834 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
DDX56-205ENST00000433257 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
DDX56-205ENST00000433257 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
DDX56-205ENST00000433257 CIAO1O76071 339 aa17.09■□□□□ 0.33
DDX56-205ENST00000433257 SLC3A2P08195 630 aaKnown RBP17.09■□□□□ 0.33
DDX56-205ENST00000433257 APOBRQ0VD83 1088 aa17.09■□□□□ 0.33
DDX56-205ENST00000433257 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
DDX56-205ENST00000433257 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
DDX56-205ENST00000433257 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
DDX56-205ENST00000433257 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.09■□□□□ 0.33
DDX56-205ENST00000433257 SPTLC2O15270 562 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
DDX56-205ENST00000433257 CMA1P23946 247 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 SLC39A6Q13433 755 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 TERF2Q15554 542 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 STOX1Q6ZVD7 989 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.32
DDX56-205ENST00000433257 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
DDX56-205ENST00000433257 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 ZSCAN12O43309 604 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 CDKL5O76039 1030 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 SIK1P57059 783 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
DDX56-205ENST00000433257 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
DDX56-205ENST00000433257 KMT5BQ4FZB7 885 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 A0A087WZG4 1122 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
DDX56-205ENST00000433257 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
DDX56-205ENST00000433257 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
DDX56-205ENST00000433257 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 SMC2O95347 1197 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 H2AFXP16104 143 aaPredicted RBP17.06■□□□□ 0.32
DDX56-205ENST00000433257 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 DDX46Q7L014 1031 aaKnown RBP17.06■□□□□ 0.32
DDX56-205ENST00000433257 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 FBXO18Q8NFZ0 1043 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 KLHDC4Q8TBB5 520 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 PPP1R13BQ96KQ4 1090 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
DDX56-205ENST00000433257 PPP6R2O75170 966 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 MYL6BP14649 208 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 KCNQ4P56696 695 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
DDX56-205ENST00000433257 TMC6Q7Z403 805 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 EDC3Q96F86 508 aaKnown RBP17.05■□□□□ 0.32
DDX56-205ENST00000433257 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
DDX56-205ENST00000433257 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDX56-205ENST00000433257 DDX60Q8IY21 1712 aaKnown RBP17.05■□□□□ 0.32
DDX56-205ENST00000433257 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 USP27XA6NNY8 438 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 H7C1W4 665 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms