RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 MAP1SQ66K74 1059 aaPredicted RBP30.71■■■□□ 2.51
CPNE1-212ENST00000430570 ZGPATQ8N5A5 531 aaKnown RBP30.71■■■□□ 2.51
CPNE1-212ENST00000430570 CRKP46108 304 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 DLGAP5Q15398 846 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 MTMR14Q8NCE2 650 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 SMC1BQ8NDV3 1235 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.7■■■□□ 2.5
CPNE1-212ENST00000430570 PRMT6Q96LA8 375 aaPredicted RBP30.7■■■□□ 2.5
CPNE1-212ENST00000430570 LNPKQ9C0E8 428 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 BOLA2Q9H3K6 86 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 SERPINA10Q9UK55 444 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 AOX1Q06278 1338 aa30.7■■■□□ 2.5
CPNE1-212ENST00000430570 ATP5JP18859 108 aa30.69■■■□□ 2.5
CPNE1-212ENST00000430570 RBM5P52756 815 aaKnown RBP eCLIP30.69■■■□□ 2.52e-6■■■□□ 15.7
CPNE1-212ENST00000430570 TSHZ3Q63HK5 1081 aa30.69■■■□□ 2.5
CPNE1-212ENST00000430570 ERICH6Q7L0X2 663 aa30.69■■■□□ 2.5
CPNE1-212ENST00000430570 ZC3H15Q8WU90 426 aaKnown RBP30.69■■■□□ 2.5
CPNE1-212ENST00000430570 ANTXR1Q9H6X2 564 aa30.69■■■□□ 2.5
CPNE1-212ENST00000430570 PIH1D3Q9NQM4 214 aaKnown RBP30.69■■■□□ 2.5
CPNE1-212ENST00000430570 ZBTB47Q9UFB7 747 aaPredicted RBP30.69■■■□□ 2.5
CPNE1-212ENST00000430570 HDLBPQ00341 1268 aaKnown RBP30.68■■■□□ 2.5
CPNE1-212ENST00000430570 DIXDC1Q155Q3 683 aa30.68■■■□□ 2.5
CPNE1-212ENST00000430570 MRIQ9BWK5 157 aa30.68■■■□□ 2.5
CPNE1-212ENST00000430570 ECHDC1Q9NTX5 307 aa30.68■■■□□ 2.5
CPNE1-212ENST00000430570 SPDYE2BA6NHP3 402 aa30.67■■■□□ 2.5
CPNE1-212ENST00000430570 SPDYE6P0CI01 402 aa30.67■■■□□ 2.5
CPNE1-212ENST00000430570 NUCB1Q02818 461 aa30.67■■■□□ 2.5
CPNE1-212ENST00000430570 SPTY2D1Q68D10 685 aaPredicted RBP30.67■■■□□ 2.5
CPNE1-212ENST00000430570 CNTROBQ8N137 903 aa30.67■■■□□ 2.5
CPNE1-212ENST00000430570 ZNF384Q8TF68 577 aa30.67■■■□□ 2.5
CPNE1-212ENST00000430570 MAST3O60307 1309 aa30.66■■■□□ 2.5
CPNE1-212ENST00000430570 SALL3Q9BXA9 1300 aa30.66■■■□□ 2.5
CPNE1-212ENST00000430570 CHD1LQ86WJ1 897 aa30.66■■■□□ 2.5
CPNE1-212ENST00000430570 TEKT1Q969V4 418 aa30.66■■■□□ 2.5
CPNE1-212ENST00000430570 GGA3Q9NZ52 723 aa30.66■■■□□ 2.5
CPNE1-212ENST00000430570 MECOMQ03112 1051 aa30.65■■■□□ 2.5
CPNE1-212ENST00000430570 FSTL1Q12841 308 aa30.65■■■□□ 2.5
CPNE1-212ENST00000430570 ANGEL2Q5VTE6 544 aaKnown RBP30.65■■■□□ 2.5
CPNE1-212ENST00000430570 EDC3Q96F86 508 aaKnown RBP30.65■■■□□ 2.5
CPNE1-212ENST00000430570 DNAJC2Q99543 621 aaKnown RBP30.65■■■□□ 2.5
CPNE1-212ENST00000430570 RAI14Q9P0K7 980 aa30.65■■■□□ 2.5
CPNE1-212ENST00000430570 LRP2BPQ9P2M1 347 aa30.65■■■□□ 2.5
CPNE1-212ENST00000430570 POLR2AP24928 1970 aaKnown RBP30.64■■■□□ 2.5
CPNE1-212ENST00000430570 MYO5AQ9Y4I1 1855 aaKnown RBP30.64■■■□□ 2.5
CPNE1-212ENST00000430570 ITGBL1O95965 494 aaPredicted RBP30.64■■■□□ 2.5
CPNE1-212ENST00000430570 HHIPL2Q6UWX4 724 aa30.64■■■□□ 2.5
CPNE1-212ENST00000430570 SCAF8Q9UPN6 1271 aaKnown RBP30.64■■■□□ 2.5
CPNE1-212ENST00000430570 C1QTNF8P60827 252 aa30.63■■■□□ 2.49
CPNE1-212ENST00000430570 DZIP1Q86YF9 867 aaKnown RBP30.63■■■□□ 2.49
CPNE1-212ENST00000430570 NSUN4Q96CB9 384 aaKnown RBP30.63■■■□□ 2.49
CPNE1-212ENST00000430570 ZDHHC15Q96MV8 337 aa30.63■■■□□ 2.49
CPNE1-212ENST00000430570 HAUS7Q99871 368 aa30.63■■■□□ 2.49
CPNE1-212ENST00000430570 GLIS2Q9BZE0 524 aaPredicted RBP30.63■■■□□ 2.49
CPNE1-212ENST00000430570 DAGLAQ9Y4D2 1042 aa30.63■■■□□ 2.49
CPNE1-212ENST00000430570 MX1P20591 662 aa30.62■■■□□ 2.49
CPNE1-212ENST00000430570 APOBEC3HQ6NTF7 200 aaKnown RBP30.62■■■□□ 2.49
CPNE1-212ENST00000430570 DLK2Q6UY11 383 aa30.62■■■□□ 2.49
CPNE1-212ENST00000430570 DCPSQ96C86 337 aaKnown RBP30.62■■■□□ 2.49
CPNE1-212ENST00000430570 GPATCH3Q96I76 525 aa30.62■■■□□ 2.49
CPNE1-212ENST00000430570 TDRD3Q9H7E2 651 aaKnown RBP30.62■■■□□ 2.49
CPNE1-212ENST00000430570 CLRN2A0PK11 232 aa30.61■■■□□ 2.49
CPNE1-212ENST00000430570 GOLIM4O00461 696 aa30.61■■■□□ 2.49
CPNE1-212ENST00000430570 FMR1Q06787 632 aaKnown RBP eCLIP30.61■■■□□ 2.497e-7■■■□□ 18.6
CPNE1-212ENST00000430570 USP48Q86UV5 1035 aa30.61■■■□□ 2.49
CPNE1-212ENST00000430570 TTC41PQ6P2S7 1318 aa30.6■■■□□ 2.49
CPNE1-212ENST00000430570 PI4K2BQ8TCG2 481 aa30.6■■■□□ 2.49
CPNE1-212ENST00000430570 MYH2Q9UKX2 1941 aa30.6■■■□□ 2.49
CPNE1-212ENST00000430570 TRAF5O00463 557 aa30.59■■■□□ 2.49
CPNE1-212ENST00000430570 CDC37L1Q7L3B6 337 aa30.59■■■□□ 2.49
CPNE1-212ENST00000430570 PAG1Q9NWQ8 432 aa30.59■■■□□ 2.49
CPNE1-212ENST00000430570 GAKO14976 1311 aa30.58■■■□□ 2.49
CPNE1-212ENST00000430570 ADM5C9JUS6 153 aa30.58■■■□□ 2.49
CPNE1-212ENST00000430570 IDH1O75874 414 aaKnown RBP30.58■■■□□ 2.49
CPNE1-212ENST00000430570 PDE1AP54750 535 aa30.58■■■□□ 2.49
CPNE1-212ENST00000430570 KRT26Q7Z3Y9 468 aa30.58■■■□□ 2.49
CPNE1-212ENST00000430570 FAM163AQ96GL9 167 aaPredicted RBP30.58■■■□□ 2.49
CPNE1-212ENST00000430570 ZNF70Q9UC06 446 aaPredicted RBP30.58■■■□□ 2.49
CPNE1-212ENST00000430570 STAP2Q9UGK3 403 aa30.58■■■□□ 2.49
CPNE1-212ENST00000430570 PITPNM2Q9BZ72 1349 aa30.57■■■□□ 2.49
CPNE1-212ENST00000430570 SPDYE2Q495Y8 402 aa30.57■■■□□ 2.48
CPNE1-212ENST00000430570 PASKQ96RG2 1323 aa30.57■■■□□ 2.48
CPNE1-212ENST00000430570 MYO1BO43795 1136 aa30.56■■■□□ 2.48
CPNE1-212ENST00000430570 TTF1Q15361 905 aaPredicted RBP30.56■■■□□ 2.48
CPNE1-212ENST00000430570 ECM29Q5VYK3 1845 aa30.56■■■□□ 2.48
CPNE1-212ENST00000430570 MROH7-TTC4A0A0A0MT08 1334 aa30.56■■■□□ 2.48
CPNE1-212ENST00000430570 DOCK2Q92608 1830 aa30.55■■■□□ 2.48
CPNE1-212ENST00000430570 NAA16Q6N069 864 aaPredicted RBP30.55■■■□□ 2.48
CPNE1-212ENST00000430570 SULF1Q8IWU6 871 aa30.55■■■□□ 2.48
CPNE1-212ENST00000430570 SLF2Q8IX21 1173 aa30.55■■■□□ 2.48
CPNE1-212ENST00000430570 VEZTQ9HBM0 779 aa30.55■■■□□ 2.48
CPNE1-212ENST00000430570 ERC2O15083 957 aa30.54■■■□□ 2.48
CPNE1-212ENST00000430570 GLRX3O76003 335 aaKnown RBP30.54■■■□□ 2.48
CPNE1-212ENST00000430570 MAP4K4O95819 1239 aaPredicted RBP30.54■■■□□ 2.48
CPNE1-212ENST00000430570 PDE4AP27815 886 aa30.54■■■□□ 2.48
CPNE1-212ENST00000430570 GSTO1P78417 241 aa30.54■■■□□ 2.48
CPNE1-212ENST00000430570 CDC42EP5Q6NZY7 148 aa30.54■■■□□ 2.48
CPNE1-212ENST00000430570 ADGRA1Q86SQ6 560 aa30.54■■■□□ 2.48
CPNE1-212ENST00000430570 PLEKHM2Q8IWE5 1019 aa30.54■■■□□ 2.48
CPNE1-212ENST00000430570 LDHCP07864 332 aa30.53■■■□□ 2.48
CPNE1-212ENST00000430570 CACNB3P54284 484 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms