RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
CTDSP1-202ENST00000428361 MRIQ9BWK5 157 aa19.29■□□□□ 0.68
CTDSP1-202ENST00000428361 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
CTDSP1-202ENST00000428361 SPRYD7Q5W111 196 aa19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 WDR66Q8TBY9 1149 aa19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 HOOK2Q96ED9 719 aa19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 GNL3LQ9NVN8 582 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 ZNF70Q9UC06 446 aaPredicted RBP19.28■□□□□ 0.68
CTDSP1-202ENST00000428361 GNAI3P08754 354 aa19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 FGFR2P21802 821 aa19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 PKN2Q16513 984 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 CEP126Q9P2H0 1117 aa19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 PCDHAC2Q9Y5I4 1007 aa19.27■□□□□ 0.68
CTDSP1-202ENST00000428361 IL15P40933 162 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-202ENST00000428361 RFX5P48382 616 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-202ENST00000428361 OTUD7BQ6GQQ9 843 aa19.26■□□□□ 0.67
CTDSP1-202ENST00000428361 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
CTDSP1-202ENST00000428361 TDRD3Q9H7E2 651 aaKnown RBP19.26■□□□□ 0.67
CTDSP1-202ENST00000428361 IQSEC3Q9UPP2 1182 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-202ENST00000428361 BCAMP50895 628 aa19.25■□□□□ 0.67
CTDSP1-202ENST00000428361 MKRN3Q13064 507 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-202ENST00000428361 NBPF12Q5TAG4 269 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-202ENST00000428361 SSC5DA1L4H1 1573 aa19.24■□□□□ 0.67
CTDSP1-202ENST00000428361 ATP2B3Q16720 1220 aa19.24■□□□□ 0.67
CTDSP1-202ENST00000428361 FKBP1CQ5VVH2 108 aa19.24■□□□□ 0.67
CTDSP1-202ENST00000428361 WNK4Q96J92 1243 aa19.24■□□□□ 0.67
CTDSP1-202ENST00000428361 ZDHHC15Q96MV8 337 aa19.24■□□□□ 0.67
CTDSP1-202ENST00000428361 LRRFIP2Q9Y608 721 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-202ENST00000428361 SEMA3EO15041 775 aa19.23■□□□□ 0.67
CTDSP1-202ENST00000428361 INTS3Q68E01 1043 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-202ENST00000428361 HHIPL2Q6UWX4 724 aa19.23■□□□□ 0.67
CTDSP1-202ENST00000428361 SIL1Q9H173 461 aa19.23■□□□□ 0.67
CTDSP1-202ENST00000428361 TCP10L2B9ZVM9 353 aa19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 GPR25O00155 361 aa19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 TBC1D8O95759 1140 aa19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 ATG9AQ7Z3C6 839 aa19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 FAM83AQ86UY5 434 aa19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 COPRSQ9NQ92 184 aa19.22■□□□□ 0.67
CTDSP1-202ENST00000428361 ZBTB22O15209 634 aa19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 USP2O75604 605 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 RGS19P49795 217 aa19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 MLLT1Q03111 559 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 ZNF296Q8WUU4 475 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 DENND2AQ9ULE3 1009 aa19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 CSADQ9Y600 493 aa19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 MYH13Q9UKX3 1938 aa19.21■□□□□ 0.67
CTDSP1-202ENST00000428361 FKTNO75072 461 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 IFNL1Q8IU54 200 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 CLMNQ96JQ2 1002 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 MEIS3Q99687 375 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 FZD1Q9UP38 647 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 AKAP2Q9Y2D5 859 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 AOX1Q06278 1338 aa19.2■□□□□ 0.66
CTDSP1-202ENST00000428361 RPAP1Q9BWH6 1393 aaPredicted RBP19.19■□□□□ 0.66
CTDSP1-202ENST00000428361 DCAF15Q66K64 600 aa19.19■□□□□ 0.66
CTDSP1-202ENST00000428361 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
CTDSP1-202ENST00000428361 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
CTDSP1-202ENST00000428361 TMEM39BQ9GZU3 492 aa19.19■□□□□ 0.66
CTDSP1-202ENST00000428361 SRGAP3O43295 1099 aa19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 WDHD1O75717 1129 aaPredicted RBP19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 LDHBP07195 334 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 MTX1Q13505 466 aa19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 GRIK5Q16478 980 aa19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 LAMB1P07942 1786 aa19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 SALL1Q9NSC2 1324 aa19.18■□□□□ 0.66
CTDSP1-202ENST00000428361 GNAI2P04899 355 aa19.17■□□□□ 0.66
CTDSP1-202ENST00000428361 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-202ENST00000428361 SLF2Q8IX21 1173 aa19.17■□□□□ 0.66
CTDSP1-202ENST00000428361 OPTNQ96CV9 577 aa19.17■□□□□ 0.66
CTDSP1-202ENST00000428361 GTF2A2P52657 109 aa19.16■□□□□ 0.66
CTDSP1-202ENST00000428361 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
CTDSP1-202ENST00000428361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■□□□□ 8
CTDSP1-202ENST00000428361 FRAT1Q92837 279 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-202ENST00000428361 ELP3Q9H9T3 547 aa19.16■□□□□ 0.66
CTDSP1-202ENST00000428361 PDS5AQ29RF7 1337 aaKnown RBP19.16■□□□□ 0.66
CTDSP1-202ENST00000428361 TESPA1A2RU30 521 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-202ENST00000428361 TRIM27P14373 513 aa19.15■□□□□ 0.66
CTDSP1-202ENST00000428361 SPTY2D1Q68D10 685 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-202ENST00000428361 FBXO46Q6PJ61 603 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-202ENST00000428361 PA2G4Q9UQ80 394 aaKnown RBP19.15■□□□□ 0.66
CTDSP1-202ENST00000428361 VGLL4Q14135 290 aa19.14■□□□□ 0.65
CTDSP1-202ENST00000428361 ZKSCAN2Q63HK3 967 aa19.14■□□□□ 0.65
CTDSP1-202ENST00000428361 CCDC102BQ68D86 513 aa19.14■□□□□ 0.65
CTDSP1-202ENST00000428361 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.14■□□□□ 0.65
CTDSP1-202ENST00000428361 FAM151AQ8WW52 585 aa19.14■□□□□ 0.65
CTDSP1-202ENST00000428361 ERO1AQ96HE7 468 aa19.14■□□□□ 0.65
CTDSP1-202ENST00000428361 IGF2BP3O00425 579 aaKnown RBP eCLIP19.13■□□□□ 0.65
CTDSP1-202ENST00000428361 PHKA1P46020 1223 aa19.13■□□□□ 0.65
CTDSP1-202ENST00000428361 CACNB3P54284 484 aa19.13■□□□□ 0.65
CTDSP1-202ENST00000428361 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
CTDSP1-202ENST00000428361 ARHGEF6Q15052 776 aa19.13■□□□□ 0.65
CTDSP1-202ENST00000428361 ERO1BQ86YB8 467 aa19.13■□□□□ 0.65
CTDSP1-202ENST00000428361 WRNIP1Q96S55 665 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms