RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, human

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
A1CF-208	ENST00000414883	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.58	□□□□□ -0.24
A1CF-208	ENST00000414883	ITPRIP	Q8IWB1	547 aa		13.58	□□□□□ -0.24
A1CF-208	ENST00000414883	FTSJ3	Q8IY81	847 aa	Known RBP	13.58	□□□□□ -0.24
A1CF-208	ENST00000414883	C2orf69	Q8N8R5	385 aa		13.58	□□□□□ -0.24
A1CF-208	ENST00000414883	TBC1D22A	Q8WUA7	517 aa		13.58	□□□□□ -0.24
A1CF-208	ENST00000414883	AKAP11	Q9UKA4	1901 aa		13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	CLRN2	A0PK11	232 aa		13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	MAP2K2	P36507	400 aa		13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	CRK	P46108	304 aa		13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	HDLBP	Q00341	1268 aa	Known RBP	13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	SPDYE2	Q495Y8	402 aa		13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	DEFB129	Q9H1M3	183 aa		13.57	□□□□□ -0.24
A1CF-208	ENST00000414883	LAMB1	P07942	1786 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883		A0A1B0GUL7	405 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	FKBP1B	P68106	108 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	GRM1	Q13255	1194 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	CCDC102B	Q68D86	513 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	RGMB	Q6NW40	437 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	MRI	Q9BWK5	157 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	ZNF70	Q9UC06	446 aa	Predicted RBP	13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	RCAN3	Q9UKA8	241 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	SUGT1	Q9Y2Z0	365 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	MYH2	Q9UKX2	1941 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	HTT	P42858	3142 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	OTOF	Q9HC10	1997 aa		13.56	□□□□□ -0.24
A1CF-208	ENST00000414883	UBE2Q2L	H0YL09	131 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	FRAT2	O75474	233 aa	Predicted RBP	13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	SLC10A3	P09131	477 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	MAP2K1	Q02750	393 aa	Predicted RBP	13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	CEP85	Q6P2H3	762 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	CDAN1	Q8IWY9	1227 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	XAGE2	Q96GT9	111 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	ZDHHC15	Q96MV8	337 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	TDRD3	Q9H7E2	651 aa	Known RBP	13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	NOP58	Q9Y2X3	529 aa	Known RBP	13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	SALL1	Q9NSC2	1324 aa		13.55	□□□□□ -0.24
A1CF-208	ENST00000414883	CENPF	P49454	3210 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	HSPA8	P11142	646 aa	Known RBP	13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	PRDX5	P30044	214 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	NOG	Q13253	232 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	RASGRF1	Q13972	1273 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	LDLRAD1	Q5T700	205 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	RASAL3	Q86YV0	1011 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	WDR66	Q8TBY9	1149 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	TEPSIN	Q96N21	525 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	FZD1	Q9UP38	647 aa		13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	PDS5A	Q29RF7	1337 aa	Known RBP	13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.54	□□□□□ -0.24
A1CF-208	ENST00000414883	SEMA3E	O15041	775 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	ZNF157	P51786	506 aa	Predicted RBP	13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	RBM5	P52756	815 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	RASA3	Q14644	834 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	MVP	Q14764	893 aa	Known RBP	13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	MAP3K11	Q16584	847 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	C20orf194	Q5TEA3	1177 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	HHIPL2	Q6UWX4	724 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	TEKT1	Q969V4	418 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	VEZT	Q9HBM0	779 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	ZBTB40	Q9NUA8	1239 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	AKAP2	Q9Y2D5	859 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	PPP2R3B	Q9Y5P8	575 aa		13.53	□□□□□ -0.24
A1CF-208	ENST00000414883	MYO1B	O43795	1136 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	CTCF	P49711	727 aa	Predicted RBP	13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	DIXDC1	Q155Q3	683 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	SIRT2	Q8IXJ6	389 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	ZNF384	Q8TF68	577 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	CCDC102A	Q96A19	550 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	GPR108	Q9NPR9	543 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	DENND2A	Q9ULE3	1009 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	COG6	Q9Y2V7	657 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	CASP8AP2	Q9UKL3	1982 aa		13.52	□□□□□ -0.25
A1CF-208	ENST00000414883	MAST3	O60307	1309 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	ARID4A	P29374	1257 aa	Predicted RBP	13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	LBX1	P52954	281 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	CACNB3	P54284	484 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	KIF23	Q02241	960 aa	Predicted RBP	13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	PI16	Q6UXB8	463 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	TMEM39B	Q9GZU3	492 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	PRDM10	Q9NQV6	1147 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	GNL3L	Q9NVN8	582 aa	Known RBP	13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	DAGLA	Q9Y4D2	1042 aa		13.51	□□□□□ -0.25
A1CF-208	ENST00000414883	TCP10L2	B9ZVM9	353 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	USP2	O75604	605 aa	Predicted RBP	13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	SURF6	O75683	361 aa	Known RBP	13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	PRKG1	Q13976	671 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	TNNI3K	Q59H18	835 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	FKBP1C	Q5VVH2	108 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	AIDA	Q96BJ3	306 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	CSRNP1	Q96S65	589 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	HMG20B	Q9P0W2	317 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	FPGT-TNNI3K	V9GXZ4	949 aa		13.5	□□□□□ -0.25
A1CF-208	ENST00000414883	RFX7	Q2KHR2	1363 aa		13.49	□□□□□ -0.25
A1CF-208	ENST00000414883	GAK	O14976	1311 aa		13.49	□□□□□ -0.25
A1CF-208	ENST00000414883	LDHB	P07195	334 aa	Known RBP	13.49	□□□□□ -0.25
A1CF-208	ENST00000414883	MS4A1	P11836	297 aa		13.49	□□□□□ -0.25
A1CF-208	ENST00000414883	NF2	P35240	595 aa		13.49	□□□□□ -0.25

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