RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NIM1KQ8IY84 436 aa12□□□□□ -0.49
DDB1-202ENST00000414411 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
DDB1-202ENST00000414411 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
DDB1-202ENST00000414411 GOLIM4O00461 696 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
DDB1-202ENST00000414411 SDSP20132 328 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 EVI5LQ96CN4 794 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 DNAJC2Q99543 621 aaKnown RBP11.99□□□□□ -0.49
DDB1-202ENST00000414411 PIH1D3Q9NQM4 214 aaKnown RBP11.99□□□□□ -0.49
DDB1-202ENST00000414411 USP17L3A6NCW0 530 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 USP17L4A6NCW7 530 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 CXCL9Q07325 125 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
DDB1-202ENST00000414411 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 USP17L1Q7RTZ2 530 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 CHMP5Q9NZZ3 219 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
DDB1-202ENST00000414411 VIL1P09327 827 aaKnown RBP11.98□□□□□ -0.49
DDB1-202ENST00000414411 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
DDB1-202ENST00000414411 TTF1Q15361 905 aaPredicted RBP11.98□□□□□ -0.49
DDB1-202ENST00000414411 PAXIP1Q6ZW49 1069 aaPredicted RBP11.98□□□□□ -0.49
DDB1-202ENST00000414411 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 CERS5Q8N5B7 392 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 KBTBD3Q8NAB2 608 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 RAD17O75943 681 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
DDB1-202ENST00000414411 GRIK5Q16478 980 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 MFSD14BQ5SR56 506 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 C9orf131Q5VYM1 1079 aa11.98□□□□□ -0.49
DDB1-202ENST00000414411 DOCK2Q92608 1830 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 PSMD14O00487 310 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 IGSF3O75054 1194 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
DDB1-202ENST00000414411 DDIT3P35638 169 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
DDB1-202ENST00000414411 GMLQ99445 158 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 MXD3Q9BW11 206 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 RNF181Q9P0P0 153 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 ABCF2Q9UG63 623 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 AK9Q5TCS8 1911 aa11.97□□□□□ -0.49
DDB1-202ENST00000414411 PRDX5P30044 214 aa11.96□□□□□ -0.49
DDB1-202ENST00000414411 CIAPIN1Q6FI81 312 aa11.96□□□□□ -0.49
DDB1-202ENST00000414411 ZNF384Q8TF68 577 aa11.96□□□□□ -0.49
DDB1-202ENST00000414411 RILPL2Q969X0 211 aa11.96□□□□□ -0.49
DDB1-202ENST00000414411 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
DDB1-202ENST00000414411 TNIP1Q15025 636 aa11.96□□□□□ -0.5
DDB1-202ENST00000414411 SPTY2D1Q68D10 685 aaPredicted RBP11.96□□□□□ -0.5
DDB1-202ENST00000414411 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.5
DDB1-202ENST00000414411 LRP2BPQ9P2M1 347 aa11.96□□□□□ -0.5
DDB1-202ENST00000414411 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
DDB1-202ENST00000414411 MYH7P12883 1935 aa11.95□□□□□ -0.5
DDB1-202ENST00000414411 EIF6P56537 245 aaKnown RBP11.95□□□□□ -0.5
DDB1-202ENST00000414411 MAP3K12Q12852 859 aa11.95□□□□□ -0.5
DDB1-202ENST00000414411 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
DDB1-202ENST00000414411 TCRBV5S4A2TA0A5A2 114 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 CHGBP05060 677 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 LDHBP07195 334 aaKnown RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 MECOMQ03112 1051 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 SLC9C2Q5TAH2 1124 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 TMED8Q6PL24 325 aaPredicted RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 AGBL3Q8NEM8 1001 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 FBXW7Q969H0 707 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 FSD1Q9BTV5 496 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 MYO3BQ8WXR4 1341 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 ZC3H4Q9UPT8 1303 aaKnown RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 RNF113AO15541 343 aaKnown RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 PDE6AP16499 860 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 CHMLP26374 656 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 MCM4P33991 863 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 ADD2P35612 726 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 UBE3CQ15386 1083 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 GPC2Q8N158 579 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
DDB1-202ENST00000414411 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■□ 20.2
DDB1-202ENST00000414411 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
DDB1-202ENST00000414411 ZFYP08048 801 aaPredicted RBP11.93□□□□□ -0.5
DDB1-202ENST00000414411 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
DDB1-202ENST00000414411 DPF2Q92785 391 aa11.93□□□□□ -0.5
DDB1-202ENST00000414411 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
DDB1-202ENST00000414411 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
DDB1-202ENST00000414411 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
DDB1-202ENST00000414411 RABEP1Q15276 862 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 LRRFIP1Q32MZ4 808 aaKnown RBP11.92□□□□□ -0.5
DDB1-202ENST00000414411 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 ADGRA1Q86SQ6 560 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
DDB1-202ENST00000414411 MAGEB6Q8N7X4 407 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms