RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 WDR17Q8IZU2 1322 aa22.08■■□□□ 1.13
TNFRSF8-202ENST00000413146 WDR19Q8NEZ3 1342 aa22.08■■□□□ 1.13
TNFRSF8-202ENST00000413146 C4AP0C0L4 1744 aa22.08■■□□□ 1.12
TNFRSF8-202ENST00000413146 C4BP0C0L5 1744 aa22.08■■□□□ 1.12
TNFRSF8-202ENST00000413146 GPAA1O43292 621 aa22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 SLC3A2P08195 630 aaKnown RBP22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 TPM4P67936 248 aa22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 CCDC85AQ96PX6 553 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 ZNF330Q9Y3S2 320 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 ZSCAN20P17040 1043 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 FEZ1Q99689 392 aa22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 OSBPL5Q9H0X9 879 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 CGNQ9P2M7 1197 aaKnown RBP22.07■■□□□ 1.12
TNFRSF8-202ENST00000413146 DMTNQ08495 405 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 ANO1Q5XXA6 986 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 NBPF11Q86T75 865 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 CCAR2Q8N163 923 aaKnown RBP22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 TRMT1Q9NXH9 659 aaKnown RBP22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 ZNF202O95125 648 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 SMC2O95347 1197 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 KIF23Q02241 960 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 IFIT5Q13325 482 aaKnown RBP22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 CADPS2Q86UW7 1296 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 GJB4Q9NTQ9 266 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 NEDD4P46934 1319 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
TNFRSF8-202ENST00000413146 KIF28PB7ZC32 967 aa22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 TRDNQ13061 729 aa22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 UTP14CQ5TAP6 766 aaKnown RBP22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 NLRP12P59046 1061 aa22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 PI16Q6UXB8 463 aa22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 PRDM11Q9NQV5 511 aa22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 KCND1Q9NSA2 647 aa22.05■■□□□ 1.12
TNFRSF8-202ENST00000413146 BIN1O00499 593 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 PCCAP05165 728 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 CCDC150Q8NCX0 1101 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 FAM89AQ96GI7 184 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 XPO4Q9C0E2 1151 aaKnown RBP22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 PFKFB1P16118 471 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 CMA1P23946 247 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 NAA30Q147X3 362 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 KIF6Q6ZMV9 814 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 IFNKQ9P0W0 207 aa22.04■■□□□ 1.12
TNFRSF8-202ENST00000413146 KIF2AO00139 706 aaPredicted RBP22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 PLA2G12BQ9BX93 195 aa22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 RIC1Q4ADV7 1423 aa22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 ZMYM6O95789 1325 aa22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 TRIM28Q13263 835 aaKnown RBP22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 METTL24Q5JXM2 366 aa22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 AXDND1Q5T1B0 1012 aaPredicted RBP22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 TMC6Q7Z403 805 aa22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 KIF18AQ8NI77 898 aa22.03■■□□□ 1.12
TNFRSF8-202ENST00000413146 RGS22Q8NE09 1264 aa22.02■■□□□ 1.12
TNFRSF8-202ENST00000413146 ANGEL1Q9UNK9 670 aaKnown RBP22.02■■□□□ 1.12
TNFRSF8-202ENST00000413146 CDKL5O76039 1030 aa22.02■■□□□ 1.11
TNFRSF8-202ENST00000413146 CSF1RP07333 972 aa22.02■■□□□ 1.11
TNFRSF8-202ENST00000413146 IL2RBP14784 551 aa22.02■■□□□ 1.11
TNFRSF8-202ENST00000413146 DHX8Q14562 1220 aaKnown RBP22.02■■□□□ 1.11
TNFRSF8-202ENST00000413146 ZBTB38Q8NAP3 1195 aaPredicted RBP22.02■■□□□ 1.11
TNFRSF8-202ENST00000413146 MROH7-TTC4A0A0A0MT08 1334 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 NRDCO43847 1150 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 MCAMP43121 646 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 METAP2P50579 478 aaKnown RBP eCLIP22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 SLC39A14Q15043 492 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 ALG1Q9BT22 464 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 GTPBP4Q9BZE4 634 aaKnown RBP22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 OGFRQ9NZT2 677 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 SHANK3Q9BYB0 1731 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 AKAP11Q9UKA4 1901 aa22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 SFPQP23246 707 aaKnown RBP eCLIP22.01■■□□□ 1.11
TNFRSF8-202ENST00000413146 MARCKSP29966 332 aaPredicted RBP22■■□□□ 1.11
TNFRSF8-202ENST00000413146 ADD2P35612 726 aa22■■□□□ 1.11
TNFRSF8-202ENST00000413146 CPLX2Q6PUV4 134 aaKnown RBP22■■□□□ 1.11
TNFRSF8-202ENST00000413146 ZNF215Q9UL58 517 aaPredicted RBP22■■□□□ 1.11
TNFRSF8-202ENST00000413146 ZNF335Q9H4Z2 1342 aaPredicted RBP22■■□□□ 1.11
TNFRSF8-202ENST00000413146 COL5A2P05997 1499 aaPredicted RBP22■■□□□ 1.11
TNFRSF8-202ENST00000413146 ATRNO75882 1429 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 GNL2Q13823 731 aaKnown RBP21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 SLC9C2Q5TAH2 1124 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 JMYQ8N9B5 988 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 TIGD1Q96MW7 591 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 NBPF3Q9H094 633 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 WDHD1O75717 1129 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 SYKP43405 635 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 TTF1Q15361 905 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 LDHAL6AQ6ZMR3 332 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 VPS37DQ86XT2 251 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 TBC1D10CQ8IV04 446 aa21.99■■□□□ 1.11
TNFRSF8-202ENST00000413146 IKBKBO14920 756 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 APPP05067 770 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 NCAPHQ15003 741 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 ARMCX5Q6P1M9 558 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 ERO1AQ96HE7 468 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 AIFM3Q96NN9 605 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 BCL11BQ9C0K0 894 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 SH2B2O14492 632 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 CYB5R4Q7L1T6 521 aa21.98■■□□□ 1.11
TNFRSF8-202ENST00000413146 TMOD3Q9NYL9 352 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms