RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 PTH1RQ03431 593 aa19.54■□□□□ 0.72
TNRC18-202ENST00000399434 LRRFIP1Q32MZ4 808 aaKnown RBP19.54■□□□□ 0.72
TNRC18-202ENST00000399434 MCMDC2Q4G0Z9 681 aa19.54■□□□□ 0.72
TNRC18-202ENST00000399434 ZSCAN25Q6NSZ9 544 aa19.54■□□□□ 0.72
TNRC18-202ENST00000399434 ERICH6Q7L0X2 663 aa19.54■□□□□ 0.72
TNRC18-202ENST00000399434 TBC1D32Q96NH3 1257 aa19.54■□□□□ 0.72
TNRC18-202ENST00000399434 ANO2Q9NQ90 1003 aa19.54■□□□□ 0.72
TNRC18-202ENST00000399434 LAMA4Q16363 1823 aa19.53■□□□□ 0.72
TNRC18-202ENST00000399434 FOXP2O15409 715 aa19.53■□□□□ 0.72
TNRC18-202ENST00000399434 REC8O95072 547 aa19.53■□□□□ 0.72
TNRC18-202ENST00000399434 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.72
TNRC18-202ENST00000399434 MFSD14BQ5SR56 506 aa19.53■□□□□ 0.72
TNRC18-202ENST00000399434 LARGE2Q8N3Y3 721 aa19.53■□□□□ 0.72
TNRC18-202ENST00000399434 ZGPATQ8N5A5 531 aaKnown RBP19.53■□□□□ 0.72
TNRC18-202ENST00000399434 VPS33BQ9H267 617 aa19.53■□□□□ 0.72
TNRC18-202ENST00000399434 DACT2Q5SW24 774 aa19.52■□□□□ 0.72
TNRC18-202ENST00000399434 TBC1D22AQ8WUA7 517 aa19.52■□□□□ 0.72
TNRC18-202ENST00000399434 G3V3G9 751 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 LDHBP07195 334 aaKnown RBP19.51■□□□□ 0.71
TNRC18-202ENST00000399434 CYP7A1P22680 504 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 DCAF8Q5TAQ9 597 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 VPS53Q5VIR6 699 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 TTLL5Q6EMB2 1281 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 FBXW7Q969H0 707 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 FOCADQ5VW36 1801 aa19.51■□□□□ 0.71
TNRC18-202ENST00000399434 GPAA1O43292 621 aa19.5■□□□□ 0.71
TNRC18-202ENST00000399434 SPTY2D1Q68D10 685 aaPredicted RBP19.5■□□□□ 0.71
TNRC18-202ENST00000399434 NAA16Q6N069 864 aaPredicted RBP19.5■□□□□ 0.71
TNRC18-202ENST00000399434 C22orf23Q9BZE7 217 aa19.5■□□□□ 0.71
TNRC18-202ENST00000399434 ECM29Q5VYK3 1845 aa19.5■□□□□ 0.71
TNRC18-202ENST00000399434 DDX60LQ5H9U9 1706 aaKnown RBP19.5■□□□□ 0.71
TNRC18-202ENST00000399434 MBD4O95243 580 aa19.49■□□□□ 0.71
TNRC18-202ENST00000399434 RBM25P49756 843 aaKnown RBP19.49■□□□□ 0.71
TNRC18-202ENST00000399434 DIXDC1Q155Q3 683 aa19.49■□□□□ 0.71
TNRC18-202ENST00000399434 STRIP1Q5VSL9 837 aa19.49■□□□□ 0.71
TNRC18-202ENST00000399434 DZIP1Q86YF9 867 aaKnown RBP19.49■□□□□ 0.71
TNRC18-202ENST00000399434 LCORLQ8N3X6 602 aa19.49■□□□□ 0.71
TNRC18-202ENST00000399434 MIGA1Q8NAN2 632 aa19.49■□□□□ 0.71
TNRC18-202ENST00000399434 RIOK1Q9BRS2 568 aaKnown RBP19.49■□□□□ 0.71
TNRC18-202ENST00000399434 USP17L3A6NCW0 530 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 USP17L4A6NCW7 530 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 FKBP1AP62942 108 aaKnown RBP19.48■□□□□ 0.71
TNRC18-202ENST00000399434 USP17L1Q7RTZ2 530 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 NIM1KQ8IY84 436 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 RBM19Q9Y4C8 960 aaKnown RBP19.48■□□□□ 0.71
TNRC18-202ENST00000399434 NAV1Q8NEY1 1877 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 LAMB1P07942 1786 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 EPB41L2O43491 1005 aaKnown RBP19.48■□□□□ 0.71
TNRC18-202ENST00000399434 EIF5BO60841 1220 aaKnown RBP19.48■□□□□ 0.71
TNRC18-202ENST00000399434 IGSF3O75054 1194 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 MAP4K1Q92918 833 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 STRBPQ96SI9 672 aaKnown RBP19.48■□□□□ 0.71
TNRC18-202ENST00000399434 ARMT1Q9H993 441 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 UPF2Q9HAU5 1272 aaKnown RBP19.48■□□□□ 0.71
TNRC18-202ENST00000399434 PALD1Q9ULE6 856 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 ZNRF3Q9ULT6 936 aa19.48■□□□□ 0.71
TNRC18-202ENST00000399434 MROH7-TTC4A0A0A0MT08 1334 aa19.47■□□□□ 0.71
TNRC18-202ENST00000399434 BAZ2AQ9UIF9 1905 aaKnown RBP19.47■□□□□ 0.71
TNRC18-202ENST00000399434 HSPD1P10809 573 aaKnown RBP19.47■□□□□ 0.71
TNRC18-202ENST00000399434 DYNLL1P63167 89 aaKnown RBP19.47■□□□□ 0.71
TNRC18-202ENST00000399434 KIF2CQ99661 725 aa19.47■□□□□ 0.71
TNRC18-202ENST00000399434 SUGT1Q9Y2Z0 365 aa19.47■□□□□ 0.71
TNRC18-202ENST00000399434 GAKO14976 1311 aa19.46■□□□□ 0.71
TNRC18-202ENST00000399434 PSMD14O00487 310 aa19.46■□□□□ 0.71
TNRC18-202ENST00000399434 RAD17O75943 681 aa19.46■□□□□ 0.71
TNRC18-202ENST00000399434 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
TNRC18-202ENST00000399434 KIAA1211Q6ZU35 1233 aa19.46■□□□□ 0.71
TNRC18-202ENST00000399434 RBM8AQ9Y5S9 174 aaKnown RBP19.46■□□□□ 0.71
TNRC18-202ENST00000399434 F8W031 263 aaPredicted RBP19.45■□□□□ 0.7
TNRC18-202ENST00000399434 HSPA4P34932 840 aa19.45■□□□□ 0.7
TNRC18-202ENST00000399434 ARHGAP27Q6ZUM4 889 aa19.45■□□□□ 0.7
TNRC18-202ENST00000399434 AIDAQ96BJ3 306 aa19.45■□□□□ 0.7
TNRC18-202ENST00000399434 GMLQ99445 158 aa19.45■□□□□ 0.7
TNRC18-202ENST00000399434 DSCC1Q9BVC3 393 aa19.45■□□□□ 0.7
TNRC18-202ENST00000399434 EPB41L4AQ9HCS5 686 aaPredicted RBP19.45■□□□□ 0.7
TNRC18-202ENST00000399434 MAGEB6P1A0A0J9YX57 407 aa19.44■□□□□ 0.7
TNRC18-202ENST00000399434 VIL1P09327 827 aaKnown RBP19.44■□□□□ 0.7
TNRC18-202ENST00000399434 CXCL9Q07325 125 aa19.44■□□□□ 0.7
TNRC18-202ENST00000399434 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
TNRC18-202ENST00000399434 TTF2Q9UNY4 1162 aaKnown RBP19.44■□□□□ 0.7
TNRC18-202ENST00000399434 DAGLAQ9Y4D2 1042 aa19.44■□□□□ 0.7
TNRC18-202ENST00000399434 TAF6LQ9Y6J9 622 aa19.44■□□□□ 0.7
TNRC18-202ENST00000399434 PRKAB2O43741 272 aa19.43■□□□□ 0.7
TNRC18-202ENST00000399434 GSTO1P78417 241 aa19.43■□□□□ 0.7
TNRC18-202ENST00000399434 RSBN1LQ6PCB5 846 aaPredicted RBP19.43■□□□□ 0.7
TNRC18-202ENST00000399434 RASEFQ8IZ41 740 aa19.43■□□□□ 0.7
TNRC18-202ENST00000399434 KCNB2Q92953 911 aa19.43■□□□□ 0.7
TNRC18-202ENST00000399434 AATFQ9NY61 560 aaKnown RBP eCLIP19.43■□□□□ 0.7
TNRC18-202ENST00000399434 SCNN1DP51172 638 aa19.42■□□□□ 0.7
TNRC18-202ENST00000399434 KIAA0825Q8IV33 1275 aa19.42■□□□□ 0.7
TNRC18-202ENST00000399434 IL17RAQ96F46 866 aa19.42■□□□□ 0.7
TNRC18-202ENST00000399434 FAM163AQ96GL9 167 aaPredicted RBP19.42■□□□□ 0.7
TNRC18-202ENST00000399434 ZNF541Q9H0D2 1346 aa19.42■□□□□ 0.7
TNRC18-202ENST00000399434 GPR75-ASB3A0A0A6YYF3 556 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 GSG1L2A8MUP6 293 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 FZD9O00144 591 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 LMNB1P20700 586 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 JDP2Q8WYK2 163 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 SLC27A2O14975 620 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 BTDP43251 543 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms