RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NECTIN1Q15223 517 aa32.98■■■□□ 2.87
CPNE1-203ENST00000397442 NAA16Q6N069 864 aaPredicted RBP32.98■■■□□ 2.87
CPNE1-203ENST00000397442 ZNF646O15015 1829 aaPredicted RBP32.98■■■□□ 2.87
CPNE1-203ENST00000397442 G3V3G9 751 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 PPIP5K2O43314 1243 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 ECE2O60344 883 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 HSPD1P10809 573 aaKnown RBP32.97■■■□□ 2.87
CPNE1-203ENST00000397442 MCCP23508 829 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 DCAF8Q5TAQ9 597 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 IL17RAQ96F46 866 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 DSCC1Q9BVC3 393 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 FHDC1Q9C0D6 1143 aaPredicted RBP32.97■■■□□ 2.87
CPNE1-203ENST00000397442 BCS1LQ9Y276 419 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 ARFGEF1Q9Y6D6 1849 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 LDHBP07195 334 aaKnown RBP32.97■■■□□ 2.87
CPNE1-203ENST00000397442 MFSD14BQ5SR56 506 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 TBC1D22AQ8WUA7 517 aa32.97■■■□□ 2.87
CPNE1-203ENST00000397442 TMED8Q6PL24 325 aaPredicted RBP32.96■■■□□ 2.87
CPNE1-203ENST00000397442 STRBPQ96SI9 672 aaKnown RBP32.96■■■□□ 2.87
CPNE1-203ENST00000397442 KCNQ5Q9NR82 932 aa32.96■■■□□ 2.87
CPNE1-203ENST00000397442 COL4A5P29400 1685 aa32.96■■■□□ 2.87
CPNE1-203ENST00000397442 TTLL5Q6EMB2 1281 aa32.95■■■□□ 2.87
CPNE1-203ENST00000397442 KCNB2Q92953 911 aa32.95■■■□□ 2.87
CPNE1-203ENST00000397442 ZNF277Q9NRM2 450 aaPredicted RBP32.95■■■□□ 2.87
CPNE1-203ENST00000397442 MBD4O95243 580 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 ANAPC15P60006 121 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 AIDAQ96BJ3 306 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 VPS33BQ9H267 617 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 DZIP1Q86YF9 867 aaKnown RBP32.94■■■□□ 2.86
CPNE1-203ENST00000397442 RASEFQ8IZ41 740 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 CERS5Q8N5B7 392 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 MIGA1Q8NAN2 632 aa32.94■■■□□ 2.86
CPNE1-203ENST00000397442 ARMT1Q9H993 441 aa32.93■■■□□ 2.86
CPNE1-203ENST00000397442 U3KPZ7 1027 aaPredicted RBP32.93■■■□□ 2.86
CPNE1-203ENST00000397442 NFKBIEO00221 500 aa32.92■■■□□ 2.86
CPNE1-203ENST00000397442 LCORLQ8N3X6 602 aa32.92■■■□□ 2.86
CPNE1-203ENST00000397442 RIOK1Q9BRS2 568 aaKnown RBP32.92■■■□□ 2.86
CPNE1-203ENST00000397442 SNX14Q9Y5W7 946 aa32.92■■■□□ 2.86
CPNE1-203ENST00000397442 CREB3L3Q68CJ9 461 aa32.91■■■□□ 2.86
CPNE1-203ENST00000397442 YDJCA8MPS7 323 aa32.91■■■□□ 2.86
CPNE1-203ENST00000397442 TAOK3Q9H2K8 898 aa32.91■■■□□ 2.86
CPNE1-203ENST00000397442 SLC27A2O14975 620 aa32.9■■■□□ 2.86
CPNE1-203ENST00000397442 STRIP1Q5VSL9 837 aa32.9■■■□□ 2.86
CPNE1-203ENST00000397442 FBXW7Q969H0 707 aa32.9■■■□□ 2.86
CPNE1-203ENST00000397442 MXD3Q9BW11 206 aa32.9■■■□□ 2.86
CPNE1-203ENST00000397442 MYH2Q9UKX2 1941 aa32.89■■■□□ 2.86
CPNE1-203ENST00000397442 PSME4Q14997 1843 aa32.89■■■□□ 2.86
CPNE1-203ENST00000397442 MAGEB6P1A0A0J9YX57 407 aa32.89■■■□□ 2.86
CPNE1-203ENST00000397442 LARGE2Q8N3Y3 721 aa32.89■■■□□ 2.86
CPNE1-203ENST00000397442 SUGT1Q9Y2Z0 365 aa32.89■■■□□ 2.86
CPNE1-203ENST00000397442 IARSP41252 1262 aaKnown RBP32.88■■■□□ 2.85
CPNE1-203ENST00000397442 DIXDC1Q155Q3 683 aa32.88■■■□□ 2.85
CPNE1-203ENST00000397442 DACT2Q5SW24 774 aa32.88■■■□□ 2.85
CPNE1-203ENST00000397442 SYT17Q9BSW7 474 aa32.88■■■□□ 2.85
CPNE1-203ENST00000397442 FKBP1AP62942 108 aaKnown RBP32.87■■■□□ 2.85
CPNE1-203ENST00000397442 DYNLL1P63167 89 aaKnown RBP32.87■■■□□ 2.85
CPNE1-203ENST00000397442 GSTO1P78417 241 aa32.87■■■□□ 2.85
CPNE1-203ENST00000397442 TAF6LQ9Y6J9 622 aa32.87■■■□□ 2.85
CPNE1-203ENST00000397442 LTBP3Q9NS15 1303 aa32.87■■■□□ 2.85
CPNE1-203ENST00000397442 USP17L3A6NCW0 530 aa32.86■■■□□ 2.85
CPNE1-203ENST00000397442 USP17L4A6NCW7 530 aa32.86■■■□□ 2.85
CPNE1-203ENST00000397442 FGAP02671 866 aa32.86■■■□□ 2.85
CPNE1-203ENST00000397442 RABEP1Q15276 862 aa32.86■■■□□ 2.85
CPNE1-203ENST00000397442 USP17L1Q7RTZ2 530 aa32.86■■■□□ 2.85
CPNE1-203ENST00000397442 PRKAB2O43741 272 aa32.85■■■□□ 2.85
CPNE1-203ENST00000397442 GSG1L2A8MUP6 293 aa32.85■■■□□ 2.85
CPNE1-203ENST00000397442 PATL2C9JE40 543 aaKnown RBP32.85■■■□□ 2.85
CPNE1-203ENST00000397442 CYP21A2P08686 494 aa32.85■■■□□ 2.85
CPNE1-203ENST00000397442 GNAT2P19087 354 aa32.85■■■□□ 2.85
CPNE1-203ENST00000397442 TSGA10IPQ3SY00 556 aa32.85■■■□□ 2.85
CPNE1-203ENST00000397442 RNF20Q5VTR2 975 aa32.85■■■□□ 2.85
CPNE1-203ENST00000397442 EPB41L4AQ9HCS5 686 aaPredicted RBP32.85■■■□□ 2.85
CPNE1-203ENST00000397442 AATFQ9NY61 560 aaKnown RBP eCLIP32.85■■■□□ 2.85
CPNE1-203ENST00000397442 FAM163AQ96GL9 167 aaPredicted RBP32.84■■■□□ 2.85
CPNE1-203ENST00000397442 MROH7-TTC4A0A0A0MT08 1334 aa32.84■■■□□ 2.85
CPNE1-203ENST00000397442 LDHCP07864 332 aa32.83■■■□□ 2.85
CPNE1-203ENST00000397442 ZKSCAN1P17029 563 aaPredicted RBP32.83■■■□□ 2.85
CPNE1-203ENST00000397442 ALX1Q15699 326 aa32.83■■■□□ 2.85
CPNE1-203ENST00000397442 DDRGK1Q96HY6 314 aa32.83■■■□□ 2.85
CPNE1-203ENST00000397442 SLC4A4Q9Y6R1 1079 aa32.83■■■□□ 2.85
CPNE1-203ENST00000397442 ADCK5Q3MIX3 580 aa32.82■■■□□ 2.84
CPNE1-203ENST00000397442 IPO9Q96P70 1041 aaKnown RBP32.82■■■□□ 2.84
CPNE1-203ENST00000397442 CTNNA3Q9UI47 895 aa32.82■■■□□ 2.84
CPNE1-203ENST00000397442 GAKO14976 1311 aa32.81■■■□□ 2.84
CPNE1-203ENST00000397442 APPP05067 770 aa32.81■■■□□ 2.84
CPNE1-203ENST00000397442 RASSF7Q02833 373 aa32.81■■■□□ 2.84
CPNE1-203ENST00000397442 IFNL3Q8IZI9 196 aa32.81■■■□□ 2.84
CPNE1-203ENST00000397442 ZNRF3Q9ULT6 936 aa32.81■■■□□ 2.84
CPNE1-203ENST00000397442 TTF2Q9UNY4 1162 aaKnown RBP32.81■■■□□ 2.84
CPNE1-203ENST00000397442 ZMYM6O95789 1325 aa32.81■■■□□ 2.84
CPNE1-203ENST00000397442 RPAP1Q9BWH6 1393 aaPredicted RBP32.81■■■□□ 2.84
CPNE1-203ENST00000397442 PRELPP51888 382 aa32.8■■■□□ 2.84
CPNE1-203ENST00000397442 PPP4CP60510 307 aa32.8■■■□□ 2.84
CPNE1-203ENST00000397442 NIM1KQ8IY84 436 aa32.8■■■□□ 2.84
CPNE1-203ENST00000397442 GPR75-ASB3A0A0A6YYF3 556 aa32.79■■■□□ 2.84
CPNE1-203ENST00000397442 F8W031 263 aaPredicted RBP32.79■■■□□ 2.84
CPNE1-203ENST00000397442 SDR42E1Q8WUS8 393 aa32.79■■■□□ 2.84
CPNE1-203ENST00000397442 CD2BP2O95400 341 aaKnown RBP32.78■■■□□ 2.84
CPNE1-203ENST00000397442 SLF2Q8IX21 1173 aa32.78■■■□□ 2.84
CPNE1-203ENST00000397442 DAGLAQ9Y4D2 1042 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms