RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MB21D2Q8IYB1 491 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-204ENST00000395756 SMARCC2Q8TAQ2 1214 aa21.01■□□□□ 0.95
SREBF1-204ENST00000395756 ZKSCAN3Q9BRR0 538 aa21.01■□□□□ 0.95
SREBF1-204ENST00000395756 NAPBQ9H115 298 aa21.01■□□□□ 0.95
SREBF1-204ENST00000395756 DACT1Q9NYF0 836 aa21.01■□□□□ 0.95
SREBF1-204ENST00000395756 ZPR1O75312 459 aa21■□□□□ 0.95
SREBF1-204ENST00000395756 POLR3DP05423 398 aaPredicted RBP21■□□□□ 0.95
SREBF1-204ENST00000395756 RESTQ13127 1097 aa21■□□□□ 0.95
SREBF1-204ENST00000395756 CDC5LQ99459 802 aaKnown RBP21■□□□□ 0.95
SREBF1-204ENST00000395756 RAI14Q9P0K7 980 aa21■□□□□ 0.95
SREBF1-204ENST00000395756 PLCH1Q4KWH8 1693 aa21■□□□□ 0.95
SREBF1-204ENST00000395756 NBPF5PQ86XG9 351 aaPredicted RBP21■□□□□ 0.95
SREBF1-204ENST00000395756 AK7Q96M32 723 aa21■□□□□ 0.95
SREBF1-204ENST00000395756 MYH14Q7Z406 1995 aaKnown RBP21■□□□□ 0.95
SREBF1-204ENST00000395756 TCRBV5S4A2TA0A5A2 114 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 SLC51AQ86UW1 340 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 LCORLQ8N3X6 602 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 ZNF274Q96GC6 653 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-204ENST00000395756 SETDB2Q96T68 719 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 ADD1P35611 737 aaKnown RBP20.99■□□□□ 0.95
SREBF1-204ENST00000395756 NFXL1Q6ZNB6 911 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 MICU3Q86XE3 530 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 ZNF512BQ96KM6 892 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-204ENST00000395756 AGXT2Q9BYV1 514 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 SCAND2PQ9GZW5 306 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-204ENST00000395756 FDPSP14324 419 aaKnown RBP20.99■□□□□ 0.95
SREBF1-204ENST00000395756 TDO2P48775 406 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 IFNL3Q8IZI9 196 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 PPP1R9BQ96SB3 815 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 BCL2L12Q9HB09 334 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
SREBF1-204ENST00000395756 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 USP25Q9UHP3 1055 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 SMIM22K7EJ46 135 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 KLRK1P26718 216 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 CCDC82Q8N4S0 544 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 SDR42E1Q8WUS8 393 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 PGBD1Q96JS3 809 aa20.98■□□□□ 0.95
SREBF1-204ENST00000395756 LLPHQ9BRT6 129 aaKnown RBP20.98■□□□□ 0.95
SREBF1-204ENST00000395756 EPB41L4AQ9HCS5 686 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-204ENST00000395756 COL22A1Q8NFW1 1626 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-204ENST00000395756 CYP7A1P22680 504 aa20.97■□□□□ 0.95
SREBF1-204ENST00000395756 HMGN5P82970 282 aaKnown RBP20.97■□□□□ 0.95
SREBF1-204ENST00000395756 AIFM3Q96NN9 605 aa20.97■□□□□ 0.95
SREBF1-204ENST00000395756 NEDD4P46934 1319 aa20.97■□□□□ 0.95
SREBF1-204ENST00000395756 BCL9LQ86UU0 1499 aa20.97■□□□□ 0.95
SREBF1-204ENST00000395756 MINDY4BA8MYZ0 360 aa20.97■□□□□ 0.95
SREBF1-204ENST00000395756 ORC3Q9UBD5 711 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-204ENST00000395756 NR1I2O75469 434 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 HPS5Q9UPZ3 1129 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 CLEC4GQ6UXB4 293 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 ADGRA1Q86SQ6 560 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 PHKBQ93100 1093 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 MINPP1Q9UNW1 487 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
SREBF1-204ENST00000395756 USP28Q96RU2 1077 aa20.96■□□□□ 0.95
SREBF1-204ENST00000395756 PATL2C9JE40 543 aaKnown RBP20.95■□□□□ 0.94
SREBF1-204ENST00000395756 RTCBQ9Y3I0 505 aaKnown RBP20.95■□□□□ 0.94
SREBF1-204ENST00000395756 TICAM2Q86XR7 235 aa20.95■□□□□ 0.94
SREBF1-204ENST00000395756 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
SREBF1-204ENST00000395756 NUP62CLQ9H1M0 184 aa20.95■□□□□ 0.94
SREBF1-204ENST00000395756 KIF3AQ9Y496 699 aa20.95■□□□□ 0.94
SREBF1-204ENST00000395756 UBE2Q2LH0YL09 131 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 CHAF1AQ13111 956 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-204ENST00000395756 SLC4A8Q2Y0W8 1093 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 C8orf76Q96K31 380 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 NLRP3Q96P20 1036 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 CARMIL3Q8ND23 1372 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 GSG1L2A8MUP6 293 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 TNMDQ9H2S6 317 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 ZSCAN16Q9H4T2 348 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-204ENST00000395756 ZSWIM5Q9P217 1185 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 TACC3Q9Y6A5 838 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 TMEM67Q5HYA8 995 aa20.94■□□□□ 0.94
SREBF1-204ENST00000395756 ANGEL1Q9UNK9 670 aaKnown RBP20.94■□□□□ 0.94
SREBF1-204ENST00000395756 CAVIN4Q5BKX8 364 aa20.93■□□□□ 0.94
SREBF1-204ENST00000395756 CFAP45Q9UL16 551 aa20.93■□□□□ 0.94
SREBF1-204ENST00000395756 IFIT3O14879 490 aaKnown RBP20.93■□□□□ 0.94
SREBF1-204ENST00000395756 ME1P48163 572 aa20.93■□□□□ 0.94
SREBF1-204ENST00000395756 METAP2P50579 478 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■□□□□ 9
SREBF1-204ENST00000395756 CMTR1Q8N1G2 835 aaKnown RBP20.93■□□□□ 0.94
SREBF1-204ENST00000395756 BBXQ8WY36 941 aaPredicted RBP20.93■□□□□ 0.94
SREBF1-204ENST00000395756 FBXW7Q969H0 707 aa20.93■□□□□ 0.94
SREBF1-204ENST00000395756 RPS8P62241 208 aaKnown RBP20.92■□□□□ 0.94
SREBF1-204ENST00000395756 DYNLL1P63167 89 aaKnown RBP20.92■□□□□ 0.94
SREBF1-204ENST00000395756 ERCC4Q92889 916 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-204ENST00000395756 NARFQ9UHQ1 456 aa20.92■□□□□ 0.94
SREBF1-204ENST00000395756 CYP2D7A0A087X1C5 515 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 DHX16O60231 1041 aaKnown RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 RPS6KA4O75676 772 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 LETM1O95202 739 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 RFC4P35249 363 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 NAA16Q6N069 864 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 FNBP4Q8N3X1 1017 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 BSDC1Q9NW68 430 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 COL4A1P02462 1669 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 A0A087WWV3 80 aa20.91■□□□□ 0.94
SREBF1-204ENST00000395756 MSNP26038 577 aaKnown RBP20.91■□□□□ 0.94
SREBF1-204ENST00000395756 CDC27P30260 824 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms