RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 NEUROD6Q96NK8 337 aa38.02■■■■□ 3.68
CMTM4-202ENST00000394106 WBP1LQ9NX94 342 aa38.02■■■■□ 3.68
CMTM4-202ENST00000394106 ZNF157P51786 506 aaPredicted RBP38.01■■■■□ 3.68
CMTM4-202ENST00000394106 OS9Q13438 667 aaPredicted RBP38.01■■■■□ 3.68
CMTM4-202ENST00000394106 MOB2Q70IA6 237 aa38.01■■■■□ 3.68
CMTM4-202ENST00000394106 XAGE2Q96GT9 111 aa38.01■■■■□ 3.68
CMTM4-202ENST00000394106 TDRD3Q9H7E2 651 aaKnown RBP38.01■■■■□ 3.68
CMTM4-202ENST00000394106 FOXN1O15353 648 aa38■■■■□ 3.67
CMTM4-202ENST00000394106 MAP2K2P36507 400 aa38■■■■□ 3.67
CMTM4-202ENST00000394106 TEKT1Q969V4 418 aa38■■■■□ 3.67
CMTM4-202ENST00000394106 DENND2AQ9ULE3 1009 aa38■■■■□ 3.67
CMTM4-202ENST00000394106 SUGT1Q9Y2Z0 365 aa38■■■■□ 3.67
CMTM4-202ENST00000394106 MAST3O60307 1309 aa37.99■■■■□ 3.67
CMTM4-202ENST00000394106 HDLBPQ00341 1268 aaKnown RBP37.99■■■■□ 3.67
CMTM4-202ENST00000394106 ZNF70Q9UC06 446 aaPredicted RBP37.99■■■■□ 3.67
CMTM4-202ENST00000394106 COG6Q9Y2V7 657 aa37.99■■■■□ 3.67
CMTM4-202ENST00000394106 SEMA3EO15041 775 aa37.98■■■■□ 3.67
CMTM4-202ENST00000394106 SURF6O75683 361 aaKnown RBP37.98■■■■□ 3.67
CMTM4-202ENST00000394106 MVPQ14764 893 aaKnown RBP37.98■■■■□ 3.67
CMTM4-202ENST00000394106 SPDYE2Q495Y8 402 aa37.98■■■■□ 3.67
CMTM4-202ENST00000394106 UBE2Q2LH0YL09 131 aa37.97■■■■□ 3.67
CMTM4-202ENST00000394106 PRKG1Q13976 671 aa37.97■■■■□ 3.67
CMTM4-202ENST00000394106 PPP2R3BQ9Y5P8 575 aa37.97■■■■□ 3.67
CMTM4-202ENST00000394106 CEP85Q6P2H3 762 aa37.96■■■■□ 3.67
CMTM4-202ENST00000394106 CCDC102AQ96A19 550 aa37.96■■■■□ 3.67
CMTM4-202ENST00000394106 NOGQ13253 232 aa37.95■■■■□ 3.67
CMTM4-202ENST00000394106 GORABQ5T7V8 394 aa37.95■■■■□ 3.67
CMTM4-202ENST00000394106 FAM155AB1AL88 458 aaPredicted RBP37.94■■■■□ 3.66
CMTM4-202ENST00000394106 RASGRF1Q13972 1273 aa37.94■■■■□ 3.66
CMTM4-202ENST00000394106 BEGAINQ9BUH8 593 aa37.94■■■■□ 3.66
CMTM4-202ENST00000394106 DDX19BQ9UMR2 479 aa37.94■■■■□ 3.66
CMTM4-202ENST00000394106 TNFAIP1Q13829 316 aa37.93■■■■□ 3.66
CMTM4-202ENST00000394106 RASA3Q14644 834 aa37.93■■■■□ 3.66
CMTM4-202ENST00000394106 ZDHHC15Q96MV8 337 aa37.93■■■■□ 3.66
CMTM4-202ENST00000394106 ZIC5Q96T25 663 aa37.93■■■■□ 3.66
CMTM4-202ENST00000394106 MRIQ9BWK5 157 aa37.93■■■■□ 3.66
CMTM4-202ENST00000394106 LDHBP07195 334 aaKnown RBP37.92■■■■□ 3.66
CMTM4-202ENST00000394106 PRDX5P30044 214 aa37.92■■■■□ 3.66
CMTM4-202ENST00000394106 YTHDC1Q96MU7 727 aaKnown RBP37.92■■■■□ 3.66
CMTM4-202ENST00000394106 SALL1Q9NSC2 1324 aa37.91■■■■□ 3.66
CMTM4-202ENST00000394106 TCP10L2B9ZVM9 353 aa37.91■■■■□ 3.66
CMTM4-202ENST00000394106 CTCFP49711 727 aaPredicted RBP37.91■■■■□ 3.66
CMTM4-202ENST00000394106 COL13A1Q5TAT6 717 aaPredicted RBP37.91■■■■□ 3.66
CMTM4-202ENST00000394106 ARMC9Q7Z3E5 817 aa37.91■■■■□ 3.66
CMTM4-202ENST00000394106 SLC10A3P09131 477 aa37.9■■■■□ 3.66
CMTM4-202ENST00000394106 HHIPL2Q6UWX4 724 aa37.9■■■■□ 3.66
CMTM4-202ENST00000394106 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.9■■■■□ 3.66
CMTM4-202ENST00000394106 FZD1Q9UP38 647 aa37.9■■■■□ 3.66
CMTM4-202ENST00000394106 NOP58Q9Y2X3 529 aaKnown RBP37.9■■■■□ 3.66
CMTM4-202ENST00000394106 RASAL3Q86YV0 1011 aa37.89■■■■□ 3.66
CMTM4-202ENST00000394106 ANGEL1Q9UNK9 670 aaKnown RBP37.89■■■■□ 3.66
CMTM4-202ENST00000394106 SSC5DA1L4H1 1573 aa37.89■■■■□ 3.66
CMTM4-202ENST00000394106 ZBTB22O15209 634 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 CACNB3P54284 484 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 DIXDC1Q155Q3 683 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 SUPT20HL1Q3ZLR7 823 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 TNNI3KQ59H18 835 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 NBPF12Q5TAG4 269 aaPredicted RBP37.88■■■■□ 3.65
CMTM4-202ENST00000394106 C20orf194Q5TEA3 1177 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 APOBEC3HQ6NTF7 200 aaKnown RBP37.88■■■■□ 3.65
CMTM4-202ENST00000394106 FPGT-TNNI3KV9GXZ4 949 aa37.88■■■■□ 3.65
CMTM4-202ENST00000394106 ZGPATQ8N5A5 531 aaKnown RBP37.87■■■■□ 3.65
CMTM4-202ENST00000394106 GPR108Q9NPR9 543 aa37.87■■■■□ 3.65
CMTM4-202ENST00000394106 TMOD2Q9NZR1 351 aa37.87■■■■□ 3.65
CMTM4-202ENST00000394106 TNNI2P48788 182 aa37.86■■■■□ 3.65
CMTM4-202ENST00000394106 KIF23Q02241 960 aaPredicted RBP37.86■■■■□ 3.65
CMTM4-202ENST00000394106 ABCF2Q9UG63 623 aa37.86■■■■□ 3.65
CMTM4-202ENST00000394106 PDS5AQ29RF7 1337 aaKnown RBP37.86■■■■□ 3.65
CMTM4-202ENST00000394106 ZBTB40Q9NUA8 1239 aa37.85■■■■□ 3.65
CMTM4-202ENST00000394106 DAGLAQ9Y4D2 1042 aa37.85■■■■□ 3.65
CMTM4-202ENST00000394106 PPP1R12BO60237 982 aaPredicted RBP37.84■■■■□ 3.65
CMTM4-202ENST00000394106 LBX1P52954 281 aa37.84■■■■□ 3.65
CMTM4-202ENST00000394106 PDE3AQ14432 1141 aa37.84■■■■□ 3.65
CMTM4-202ENST00000394106 TMEM39BQ9GZU3 492 aa37.84■■■■□ 3.65
CMTM4-202ENST00000394106 CHMP4BQ9H444 224 aaKnown RBP37.84■■■■□ 3.65
CMTM4-202ENST00000394106 HSPA8P11142 646 aaKnown RBP37.83■■■■□ 3.65
CMTM4-202ENST00000394106 HMG20BQ9P0W2 317 aa37.83■■■■□ 3.65
CMTM4-202ENST00000394106 EXOC6BQ9Y2D4 811 aa37.83■■■■□ 3.65
CMTM4-202ENST00000394106 PI16Q6UXB8 463 aa37.82■■■■□ 3.64
CMTM4-202ENST00000394106 DZIP1Q86YF9 867 aaKnown RBP37.82■■■■□ 3.64
CMTM4-202ENST00000394106 SPATA5Q8NB90 893 aa37.82■■■■□ 3.64
CMTM4-202ENST00000394106 DBNDD2Q9BQY9 259 aa37.82■■■■□ 3.64
CMTM4-202ENST00000394106 ZBTB4Q9P1Z0 1013 aaPredicted RBP37.82■■■■□ 3.64
CMTM4-202ENST00000394106 ARID4AP29374 1257 aaPredicted RBP37.81■■■■□ 3.64
CMTM4-202ENST00000394106 CDAN1Q8IWY9 1227 aa37.81■■■■□ 3.64
CMTM4-202ENST00000394106 TSKSQ9UJT2 592 aa37.81■■■■□ 3.64
CMTM4-202ENST00000394106 UQCRFS1P1P0C7P4 283 aa37.8■■■■□ 3.64
CMTM4-202ENST00000394106 LDLRAD1Q5T700 205 aa37.8■■■■□ 3.64
CMTM4-202ENST00000394106 SPTY2D1Q68D10 685 aaPredicted RBP37.8■■■■□ 3.64
CMTM4-202ENST00000394106 RPAP2Q8IXW5 612 aaPredicted RBP37.8■■■■□ 3.64
CMTM4-202ENST00000394106 TEPSINQ96N21 525 aa37.8■■■■□ 3.64
CMTM4-202ENST00000394106 TTC39AQ5SRH9 613 aa37.79■■■■□ 3.64
CMTM4-202ENST00000394106 MYH2Q9UKX2 1941 aa37.79■■■■□ 3.64
CMTM4-202ENST00000394106 MCAMP43121 646 aa37.78■■■■□ 3.64
CMTM4-202ENST00000394106 MKRN3Q13064 507 aaKnown RBP37.78■■■■□ 3.64
CMTM4-202ENST00000394106 MAP3K11Q16584 847 aa37.78■■■■□ 3.64
CMTM4-202ENST00000394106 CCDC158Q5M9N0 1113 aa37.78■■■■□ 3.64
CMTM4-202ENST00000394106 PRDM10Q9NQV6 1147 aa37.78■■■■□ 3.64
CMTM4-202ENST00000394106 CDC42EP5Q6NZY7 148 aa37.77■■■■□ 3.64
CMTM4-202ENST00000394106 ERICH6Q7L0X2 663 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms