RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NDUFAB1O14561 156 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 KRT2P35908 639 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 RPS6KA2Q15349 733 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 ANKLE2Q86XL3 938 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 RRP36Q96EU6 259 aaKnown RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
RFX3-204ENST00000382004 SPECC1L-ADORA2AF8WAN1 911 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 I3L4J1 428 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 TRPC3Q13507 836 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 SRGAP1Q7Z6B7 1085 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 OSCARQ8IYS5 282 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 OGFOD1Q8N543 542 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 GABPB2Q8TAK5 448 aaPredicted RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 STK38LQ9Y2H1 464 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 ATXN8OSP0DMR3 200 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 GNAQP50148 359 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 RILPL1Q5EBL4 403 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 ZNF365Q70YC5 407 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 ANKRD50Q9ULJ7 1429 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 PPP1R12AO14974 1030 aaPredicted RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 TNFAIP3P21580 790 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 INPP5BP32019 993 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 PPP2R3AQ06190 1150 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 WAPLQ7Z5K2 1190 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 MRPL46Q9H2W6 279 aaKnown RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 TRIM75PA6NK02 468 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 EPB41P11171 864 aaKnown RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 MX2P20592 715 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 CCDC38Q502W7 563 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 CEP128Q6ZU80 1094 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 PNMA8AQ86V59 439 aaPredicted RBP6.57□□□□□ -1.36
RFX3-204ENST00000382004 ARHGAP24Q8N264 748 aa6.57□□□□□ -1.36
RFX3-204ENST00000382004 NSD3Q9BZ95 1437 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 MIER3Q7Z3K6 550 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 NBPF5PQ86XG9 351 aaPredicted RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 TMTC2Q8N394 836 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 RNF10Q8N5U6 811 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 PSPC1Q8WXF1 523 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 NGLY1Q96IV0 654 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 NBPF4Q96M43 638 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 USTQ9Y2C2 406 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 ERBINQ96RT1 1412 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 GIGYF1O75420 1035 aaPredicted RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 NOP9Q86U38 636 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 FAM200AQ8TCP9 573 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 MGARPQ8TDB4 240 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 CTNND2Q9UQB3 1225 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 DNM1Q05193 864 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 CCDC125Q86Z20 511 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 TMX3Q96JJ7 454 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 GBP5Q96PP8 586 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 TACO1Q9BSH4 297 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 CNNM2Q9H8M5 875 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 DBF4Q9UBU7 674 aaPredicted RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 CCDC169A6NNP5 214 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 OPHN1O60890 802 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 TUBB4BP68371 445 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 DTHD1Q6ZMT9 781 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 CHST3Q7LGC8 479 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 VCX3AQ9NNX9 186 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 ACTN4O43707 911 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 CCDC152Q4G0S7 254 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 AMOTQ4VCS5 1084 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 UQCRFS1P1P0C7P4 283 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 COG7P83436 770 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 RBBP5Q15291 538 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 KLHL40Q2TBA0 621 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 C20orf194Q5TEA3 1177 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 NXNQ6DKJ4 435 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 NSMCE1Q8WV22 266 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 NUDT16Q96DE0 195 aaKnown RBP6.56□□□□□ -1.36
RFX3-204ENST00000382004 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 GINS2Q9Y248 185 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 EVCP57679 992 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 TYRO3Q06418 890 aa6.56□□□□□ -1.36
RFX3-204ENST00000382004 SPDYE16A6NNV3 312 aaPredicted RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 SPTLC2O15270 562 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 ALDH1L2Q3SY69 923 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 SPDYE2Q495Y8 402 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 BSPRYQ5W0U4 402 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 TRIM68Q6AZZ1 485 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 ASIC3Q9UHC3 531 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 FAM170AA1A519 330 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 TRAF5O00463 557 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 U2AF2P26368 475 aaKnown RBP eCLIP6.55□□□□□ -1.363e-6■■□□□ 13.6
RFX3-204ENST00000382004 C8orf74Q6P047 294 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 ZGPATQ8N5A5 531 aaKnown RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 PDZD8Q8NEN9 1154 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 EXOC5O00471 708 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 CNGA1P29973 690 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 TMTC4Q5T4D3 741 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 TAOK1Q7L7X3 1001 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 RNF168Q8IYW5 571 aaPredicted RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 POLA1P09884 1462 aaPredicted RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 GOLGA6CA6NDK9 693 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 GOLGA6DP0CG33 693 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 RARSP54136 660 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms