RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 DTNBP1Q96EV8 351 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 TRIM7Q9C029 511 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 PRDM11Q9NQV5 511 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.61□□□□□ -1.67
PTAR1-202ENST00000377200 GIGYF1O75420 1035 aaPredicted RBP4.61□□□□□ -1.67
PTAR1-202ENST00000377200 ZC3H6P61129 1189 aaKnown RBP4.61□□□□□ -1.67
PTAR1-202ENST00000377200 PPFIA1Q13136 1202 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 SH2D4BQ5SQS7 431 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 NFXL1Q6ZNB6 911 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 ARMC2Q8NEN0 867 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 CEP63Q96MT8 703 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 ANKRD62A6NC57 917 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 SLC3A2P08195 630 aaKnown RBP4.61□□□□□ -1.67
PTAR1-202ENST00000377200 SLFN14P0C7P3 912 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 CCT5P48643 541 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 PSMD2Q13200 908 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 MAP7Q14244 749 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 SULT6B1Q6IMI4 303 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 CNNM3Q8NE01 707 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 CAPS2Q9BXY5 557 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 VCX3BQ9H321 246 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 CBX8Q9HC52 389 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 VCX3AQ9NNX9 186 aa4.61□□□□□ -1.67
PTAR1-202ENST00000377200 PLEKHG2Q9H7P9 1386 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 MAP3K19Q56UN5 1328 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 PDCD2Q16342 344 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 IQCA1Q86XH1 822 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 SELENOSQ9BQE4 189 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 MATR3P43243 847 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 EVA1CP58658 441 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 MED4Q9NPJ6 270 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 TPX2Q9ULW0 747 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 MARCH6O60337 910 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 TWISTNBQ3B726 338 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 GBP7Q8N8V2 638 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 BCAS4Q8TDM0 211 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 INTS4Q96HW7 963 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 TTC14Q96N46 770 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 PPP1R12CQ9BZL4 782 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 YIPF3Q9GZM5 350 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 ACTR5Q9H9F9 607 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 MRFAP1Q9Y605 127 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 HMOX1P09601 288 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 G3BP1Q13283 466 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 CCDC178Q5BJE1 867 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 ORAI2Q96SN7 254 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 NUP88Q99567 741 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 UTP14AQ9BVJ6 771 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 PDE11AQ9HCR9 933 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 RWDD2BP57060 319 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 HLTFQ14527 1009 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 DDX46Q7L014 1031 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 SSH2Q76I76 1423 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 GCP02774 474 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 UBASH3AP57075 661 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 E2F5Q15329 346 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 FAM204AQ9H8W3 233 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 TFIP11Q9UBB9 837 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 ORC3Q9UBD5 711 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 FAN1Q9Y2M0 1017 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 ZNF335Q9H4Z2 1342 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 GCFC2P16383 781 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 SETDB1Q15047 1291 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 ZNF513Q8N8E2 541 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 CCHCR1Q8TD31 782 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 TSC22D3Q99576 134 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 PHRF1Q9P1Y6 1649 aaKnown RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 IL13P35225 146 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 RAB11FIP4Q86YS3 637 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 PCDHB15Q9Y5E8 787 aa4.6□□□□□ -1.67
PTAR1-202ENST00000377200 TRPM3Q9HCF6 1732 aaPredicted RBP4.6□□□□□ -1.67
PTAR1-202ENST00000377200 ALS2Q96Q42 1657 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 BIN1O00499 593 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 TATP17735 454 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 ZNF710Q8N1W2 664 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 NAPGQ99747 312 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 STMN4Q9H169 189 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 IMPACTQ9P2X3 320 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 SPG7Q9UQ90 795 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 PSDA5PKW4 1024 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 GOLGA6BA6NDN3 693 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 PNMA6AP0CW24 399 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 EIF4A2Q14240 407 aaKnown RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 KRT32Q14532 448 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 JADE2Q9NQC1 790 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 VIRMAQ69YN4 1812 aaKnown RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 COL3A1P02461 1466 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 SURF6O75683 361 aaKnown RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 UBTFL1P0CB47 393 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 TRAF1Q13077 416 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 LONRF2Q1L5Z9 754 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 ARMCX6Q7L4S7 300 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 TEX11Q8IYF3 940 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 SOS1Q07889 1333 aaPredicted RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 TRIM66O15016 1216 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 BRD1O95696 1058 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 RPSAP08865 295 aaKnown RBP4.59□□□□□ -1.67
PTAR1-202ENST00000377200 HOXC9P31274 260 aa4.59□□□□□ -1.67
PTAR1-202ENST00000377200 DNM1Q05193 864 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms