RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
C9orf85-202ENST00000377027 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
C9orf85-202ENST00000377027 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 ADM5C9JUS6 153 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 PDE8AO60658 829 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 GRM1Q13255 1194 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
C9orf85-202ENST00000377027 USP48Q86UV5 1035 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 WWC1Q8IX03 1113 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 AIDAQ96BJ3 306 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
C9orf85-202ENST00000377027 CWC25Q9NXE8 425 aaPredicted RBP12.3□□□□□ -0.44
C9orf85-202ENST00000377027 UFL1O94874 794 aa12.29□□□□□ -0.44
C9orf85-202ENST00000377027 VIL1P09327 827 aaKnown RBP12.29□□□□□ -0.44
C9orf85-202ENST00000377027 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
C9orf85-202ENST00000377027 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
C9orf85-202ENST00000377027 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
C9orf85-202ENST00000377027 GMLQ99445 158 aa12.29□□□□□ -0.44
C9orf85-202ENST00000377027 ZNF408Q9H9D4 720 aa12.29□□□□□ -0.44
C9orf85-202ENST00000377027 TSR3Q9UJK0 312 aaKnown RBP12.29□□□□□ -0.44
C9orf85-202ENST00000377027 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
C9orf85-202ENST00000377027 NEURL1BA8MQ27 555 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 CASP7P55210 303 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 CTSWP56202 376 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
C9orf85-202ENST00000377027 KSR2Q6VAB6 950 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 CDC37L1Q7L3B6 337 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 TTLL11Q8NHH1 800 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 HHIPL1Q96JK4 782 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 GREM2Q9H772 168 aa12.28□□□□□ -0.44
C9orf85-202ENST00000377027 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
C9orf85-202ENST00000377027 H7C1D1 291 aa12.27□□□□□ -0.45
C9orf85-202ENST00000377027 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
C9orf85-202ENST00000377027 ECE1P42892 770 aa12.27□□□□□ -0.45
C9orf85-202ENST00000377027 CCDC152Q4G0S7 254 aa12.27□□□□□ -0.45
C9orf85-202ENST00000377027 EYA3Q99504 573 aa12.27□□□□□ -0.45
C9orf85-202ENST00000377027 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
C9orf85-202ENST00000377027 GGA1Q9UJY5 639 aa12.27□□□□□ -0.45
C9orf85-202ENST00000377027 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
C9orf85-202ENST00000377027 RNF40O75150 1001 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 MAP2K2P36507 400 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 ZNF280AP59817 542 aaPredicted RBP12.26□□□□□ -0.45
C9orf85-202ENST00000377027 PPP4CP60510 307 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 KIF4BQ2VIQ3 1234 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
C9orf85-202ENST00000377027 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 MXD3Q9BW11 206 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
C9orf85-202ENST00000377027 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 ANKIB1Q9P2G1 1089 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 XDHP47989 1333 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 HTTP42858 3142 aa12.26□□□□□ -0.45
C9orf85-202ENST00000377027 PAPPA2Q9BXP8 1791 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 H7C1W4 665 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 TRIM66O15016 1216 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 DDX58O95786 925 aaKnown RBP12.25□□□□□ -0.45
C9orf85-202ENST00000377027 KLRK1P26718 216 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
C9orf85-202ENST00000377027 KRT26Q7Z3Y9 468 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 ANKRD18AQ8IVF6 992 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 MINPP1Q9UNW1 487 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 SCAF8Q9UPN6 1271 aaKnown RBP12.25□□□□□ -0.45
C9orf85-202ENST00000377027 IL16Q14005 1332 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 MED23Q9ULK4 1368 aa12.25□□□□□ -0.45
C9orf85-202ENST00000377027 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
C9orf85-202ENST00000377027 HUNKP57058 714 aa12.24□□□□□ -0.45
C9orf85-202ENST00000377027 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
C9orf85-202ENST00000377027 FLIIQ13045 1269 aa12.24□□□□□ -0.45
C9orf85-202ENST00000377027 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
C9orf85-202ENST00000377027 UBE3BQ7Z3V4 1068 aa12.24□□□□□ -0.45
C9orf85-202ENST00000377027 GBA2Q9HCG7 927 aaPredicted RBP12.24□□□□□ -0.45
C9orf85-202ENST00000377027 BSDC1Q9NW68 430 aaPredicted RBP12.24□□□□□ -0.45
C9orf85-202ENST00000377027 IRS2Q9Y4H2 1338 aa12.24□□□□□ -0.45
C9orf85-202ENST00000377027 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
C9orf85-202ENST00000377027 GCKRQ14397 625 aa12.23□□□□□ -0.45
C9orf85-202ENST00000377027 AMHR2Q16671 573 aa12.23□□□□□ -0.45
C9orf85-202ENST00000377027 DACT2Q5SW24 774 aa12.23□□□□□ -0.45
C9orf85-202ENST00000377027 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
C9orf85-202ENST00000377027 AGBL3Q8NEM8 1001 aa12.23□□□□□ -0.45
C9orf85-202ENST00000377027 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
C9orf85-202ENST00000377027 CENPFP49454 3210 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 SNAP23O00161 211 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 VAMP4O75379 141 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 CCT4P50991 539 aaKnown RBP12.22□□□□□ -0.45
C9orf85-202ENST00000377027 SCARF1Q14162 830 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 NYAP1Q6ZVC0 841 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 CDCA5Q96FF9 252 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 LAMB1P07942 1786 aa12.22□□□□□ -0.45
C9orf85-202ENST00000377027 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.45
C9orf85-202ENST00000377027 USP17L3A6NCW0 530 aa12.21□□□□□ -0.45
C9orf85-202ENST00000377027 USP17L4A6NCW7 530 aa12.21□□□□□ -0.45
C9orf85-202ENST00000377027 CSF1RP07333 972 aa12.21□□□□□ -0.45
C9orf85-202ENST00000377027 SLC10A3P09131 477 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms