RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 ZNF354CQ86Y25 554 aa11.05□□□□□ -0.64
SPEN-201ENST00000375759 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
SPEN-201ENST00000375759 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
SPEN-201ENST00000375759 FRMD4BQ9Y2L6 1034 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 TRMT1LQ7Z2T5 733 aaKnown RBP11.04□□□□□ -0.64
SPEN-201ENST00000375759 NME9Q86XW9 330 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 KIFAP3Q92845 792 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 FAM160A1Q05DH4 1040 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 SH3BGRP55822 239 aaPredicted RBP11.04□□□□□ -0.64
SPEN-201ENST00000375759 UBL4BQ8N7F7 174 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 PLCB1Q9NQ66 1216 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 ZNF853P0CG23 659 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 AK2P54819 239 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 PPFIA1Q13136 1202 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 SNRPA1P09661 255 aaKnown RBP11.04□□□□□ -0.64
SPEN-201ENST00000375759 GJC1P36383 396 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 EPSTI1Q96J88 318 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 NUF2Q9BZD4 464 aa11.04□□□□□ -0.64
SPEN-201ENST00000375759 GOLGA6BA6NDN3 693 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 GRM8O00222 908 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 USHBP1Q8N6Y0 703 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 MCUR1Q96AQ8 359 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 ARHGEF11O15085 1522 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 GPTP24298 496 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 EMILIN1Q9Y6C2 1016 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 NESP48681 1621 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 NCBP1Q09161 790 aaKnown RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 GKAP1Q5VSY0 366 aaPredicted RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 IGSF22Q8N9C0 903 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 MAGI1Q96QZ7 1491 aaPredicted RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 ABCC5O15440 1437 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 DHX32Q7L7V1 743 aaKnown RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 RASSF2P50749 326 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 AFAP1L2Q8N4X5 818 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 GBP7Q8N8V2 638 aaPredicted RBP11.03□□□□□ -0.64
SPEN-201ENST00000375759 ZBTB3Q9H5J0 574 aa11.03□□□□□ -0.64
SPEN-201ENST00000375759 WASLO00401 505 aaPredicted RBP11.02□□□□□ -0.64
SPEN-201ENST00000375759 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.64
SPEN-201ENST00000375759 CREB3L3Q68CJ9 461 aa11.02□□□□□ -0.64
SPEN-201ENST00000375759 NUP58Q9BVL2 599 aa11.02□□□□□ -0.64
SPEN-201ENST00000375759 IL15P40933 162 aaPredicted RBP11.02□□□□□ -0.65
SPEN-201ENST00000375759 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 EPB41P11171 864 aaKnown RBP11.02□□□□□ -0.65
SPEN-201ENST00000375759 CYP7A1P22680 504 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 CCDC38Q502W7 563 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 CCDC65Q8IXS2 484 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 ATP2B3Q16720 1220 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.65
SPEN-201ENST00000375759 NOX5Q96PH1 765 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 PPP1R12CQ9BZL4 782 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 MCM7P33993 719 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 CCT6BQ92526 530 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 MEIS3Q99687 375 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 RAD50Q92878 1312 aa11.02□□□□□ -0.65
SPEN-201ENST00000375759 ATP5J2-PTCD1G3V325 749 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 STX17P56962 302 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 GABPB2Q8TAK5 448 aaPredicted RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 TTLL12Q14166 644 aaPredicted RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 CNNM4Q6P4Q7 775 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 CCT6AP40227 531 aaKnown RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 HSPA1LP34931 641 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 ARHGEF2Q92974 986 aaKnown RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 IGSF3O75054 1194 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 B4DLN1 442 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 NMIQ13287 307 aaPredicted RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 RNF10Q8N5U6 811 aaKnown RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 LLPHQ9BRT6 129 aaKnown RBP11.01□□□□□ -0.65
SPEN-201ENST00000375759 AGTPBP1Q9UPW5 1226 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 PLCD1P51178 756 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 MTMR3Q13615 1198 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 TBC1D31Q96DN5 1066 aa11.01□□□□□ -0.65
SPEN-201ENST00000375759 CRCPO75575 148 aa11□□□□□ -0.65
SPEN-201ENST00000375759 U2AF2P26368 475 aaKnown RBP eCLIP11□□□□□ -0.653e-8■■■■■ 33.8
SPEN-201ENST00000375759 DCAF17Q5H9S7 520 aaPredicted RBP11□□□□□ -0.65
SPEN-201ENST00000375759 NBPF6Q5VWK0 638 aa11□□□□□ -0.65
SPEN-201ENST00000375759 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
SPEN-201ENST00000375759 LEO1Q8WVC0 666 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms