RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 LRRFIP2Q9Y608 721 aaKnown RBP17.77■□□□□ 0.44
NELFE-201ENST00000375425 USP2O75604 605 aaPredicted RBP17.76■□□□□ 0.43
NELFE-201ENST00000375425 SLC5A1P13866 664 aa17.76■□□□□ 0.43
NELFE-201ENST00000375425 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
NELFE-201ENST00000375425 CLMNQ96JQ2 1002 aa17.76■□□□□ 0.43
NELFE-201ENST00000375425 MEIS3Q99687 375 aa17.76■□□□□ 0.43
NELFE-201ENST00000375425 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
NELFE-201ENST00000375425 SSC5DA1L4H1 1573 aa17.75■□□□□ 0.43
NELFE-201ENST00000375425 UNCXA6NJT0 531 aa17.75■□□□□ 0.43
NELFE-201ENST00000375425 TCP10L2B9ZVM9 353 aa17.75■□□□□ 0.43
NELFE-201ENST00000375425 CIAO1O76071 339 aa17.75■□□□□ 0.43
NELFE-201ENST00000375425 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
NELFE-201ENST00000375425 MRIQ9BWK5 157 aa17.75■□□□□ 0.43
NELFE-201ENST00000375425 CEP126Q9P2H0 1117 aa17.75■□□□□ 0.43
NELFE-201ENST00000375425 AKAP11Q9UKA4 1901 aa17.74■□□□□ 0.43
NELFE-201ENST00000375425 IREB2P48200 963 aaKnown RBP17.74■□□□□ 0.43
NELFE-201ENST00000375425 INTS3Q68E01 1043 aaKnown RBP17.74■□□□□ 0.43
NELFE-201ENST00000375425 TEKT1Q969V4 418 aa17.74■□□□□ 0.43
NELFE-201ENST00000375425 PA2G4Q9UQ80 394 aaKnown RBP17.74■□□□□ 0.43
NELFE-201ENST00000375425 TEPSINQ96N21 525 aa17.73■□□□□ 0.43
NELFE-201ENST00000375425 TMEM39BQ9GZU3 492 aa17.73■□□□□ 0.43
NELFE-201ENST00000375425 SUGT1Q9Y2Z0 365 aa17.73■□□□□ 0.43
NELFE-201ENST00000375425 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 BCAR3O75815 825 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 ZBTB48P10074 688 aaPredicted RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 IL15P40933 162 aaPredicted RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 TNNI2P48788 182 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 INHBEP58166 350 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 ANKRD13AQ8IZ07 590 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 MIER1Q8N108 512 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 WNK4Q96J92 1243 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 ZDHHC15Q96MV8 337 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 COPRSQ9NQ92 184 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 MANSC4A6NHS7 340 aaPredicted RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 GNAI3P08754 354 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 CACNB3P54284 484 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 APOBEC3HQ6NTF7 200 aaKnown RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 CTU1Q7Z7A3 348 aaKnown RBP17.72■□□□□ 0.43
NELFE-201ENST00000375425 WDR66Q8TBY9 1149 aa17.72■□□□□ 0.43
NELFE-201ENST00000375425 GPR25O00155 361 aa17.71■□□□□ 0.43
NELFE-201ENST00000375425 TRIM27P14373 513 aa17.71■□□□□ 0.43
NELFE-201ENST00000375425 HHIPL2Q6UWX4 724 aa17.71■□□□□ 0.43
NELFE-201ENST00000375425 FRAT1Q92837 279 aaPredicted RBP17.71■□□□□ 0.43
NELFE-201ENST00000375425 R3HDMLQ9H3Y0 253 aa17.71■□□□□ 0.43
NELFE-201ENST00000375425 MAST3O60307 1309 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 ALDH1A1P00352 501 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 GJA5P36382 358 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 IFNL1Q8IU54 200 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 CFHR5Q9BXR6 569 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 GNL3LQ9NVN8 582 aaKnown RBP17.7■□□□□ 0.42
NELFE-201ENST00000375425 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
NELFE-201ENST00000375425 RGS19P49795 217 aa17.69■□□□□ 0.42
NELFE-201ENST00000375425 TIMM10P62072 90 aa17.69■□□□□ 0.42
NELFE-201ENST00000375425 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
NELFE-201ENST00000375425 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
NELFE-201ENST00000375425 ATF7IPQ6VMQ6 1270 aa17.69■□□□□ 0.42
NELFE-201ENST00000375425 ELP3Q9H9T3 547 aa17.69■□□□□ 0.42
NELFE-201ENST00000375425 TMOD2Q9NZR1 351 aa17.69■□□□□ 0.42
NELFE-201ENST00000375425 PHKA1P46020 1223 aa17.68■□□□□ 0.42
NELFE-201ENST00000375425 MAP3K9P80192 1104 aa17.68■□□□□ 0.42
NELFE-201ENST00000375425 FKBP1CQ5VVH2 108 aa17.68■□□□□ 0.42
NELFE-201ENST00000375425 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.68■□□□□ 0.42
NELFE-201ENST00000375425 CLUAP1Q96AJ1 413 aa17.68■□□□□ 0.42
NELFE-201ENST00000375425 IGF2BP3O00425 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
NELFE-201ENST00000375425 PRDX5P30044 214 aa17.67■□□□□ 0.42
NELFE-201ENST00000375425 ADORA1P30542 326 aa17.67■□□□□ 0.42
NELFE-201ENST00000375425 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
NELFE-201ENST00000375425 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
NELFE-201ENST00000375425 OPTNQ96CV9 577 aa17.67■□□□□ 0.42
NELFE-201ENST00000375425 DENND2AQ9ULE3 1009 aa17.67■□□□□ 0.42
NELFE-201ENST00000375425 FKTNO75072 461 aa17.66■□□□□ 0.42
NELFE-201ENST00000375425 MTX1Q13505 466 aa17.66■□□□□ 0.42
NELFE-201ENST00000375425 DIXDC1Q155Q3 683 aa17.66■□□□□ 0.42
NELFE-201ENST00000375425 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
NELFE-201ENST00000375425 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
NELFE-201ENST00000375425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.66■□□□□ 0.428e-8■□□□□ 9.6
NELFE-201ENST00000375425 SEMA3EO15041 775 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 GNAI2P04899 355 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 LDHBP07195 334 aaKnown RBP17.65■□□□□ 0.42
NELFE-201ENST00000375425 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
NELFE-201ENST00000375425 VGLL4Q14135 290 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 OTUD7BQ6GQQ9 843 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 PTPN18Q99952 460 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 DAGLAQ9Y4D2 1042 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 CSADQ9Y600 493 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 ARAP2Q8WZ64 1704 aa17.65■□□□□ 0.42
NELFE-201ENST00000375425 TESPA1A2RU30 521 aaPredicted RBP17.64■□□□□ 0.42
NELFE-201ENST00000375425 TFCP2Q12800 502 aa17.64■□□□□ 0.42
NELFE-201ENST00000375425 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.42
NELFE-201ENST00000375425 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.42
NELFE-201ENST00000375425 AKAP2Q9Y2D5 859 aa17.64■□□□□ 0.42
NELFE-201ENST00000375425 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
NELFE-201ENST00000375425 A0A1B0GUL7 405 aa17.64■□□□□ 0.41
NELFE-201ENST00000375425 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.41
NELFE-201ENST00000375425 XAGE2Q96GT9 111 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms