RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 NPHP3Q7Z494 1330 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 CCDC25Q86WR0 208 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 LZTFL1Q9NQ48 299 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 NKIRAS1Q9NYS0 192 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 PLCD1P51178 756 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 KARSQ15046 597 aaKnown RBP12.97□□□□□ -0.33
VCL-202ENST00000372755 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
VCL-202ENST00000372755 TERF1P54274 439 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 RAPGEF1Q13905 1077 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
VCL-202ENST00000372755 TLDC2A0PJX2 215 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 CCT6BQ92526 530 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 VPS18Q9P253 973 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 ZBTB21Q9ULJ3 1066 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 CIB2O75838 187 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 SLC8A3P57103 927 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 TRIM14Q14142 442 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 DISP3Q9P2K9 1392 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.33
VCL-202ENST00000372755 STX10O60499 249 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 CLCN1P35523 988 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 PPFIBP2Q8ND30 876 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 IFNKQ9P0W0 207 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 ELP1O95163 1332 aa12.96□□□□□ -0.33
VCL-202ENST00000372755 AK2P54819 239 aa12.96□□□□□ -0.34
VCL-202ENST00000372755 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.34
VCL-202ENST00000372755 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.34
VCL-202ENST00000372755 FNBP1Q96RU3 617 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 HS1BP3Q53T59 392 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 AKR1B15C9JRZ8 316 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 ERCC5P28715 1186 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 CEBPAP49715 358 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 DDB1Q16531 1140 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 HDXQ7Z353 690 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 FAM204AQ9H8W3 233 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 CLUL1Q15846 466 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 MIGA1Q8NAN2 632 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 STK24Q9Y6E0 443 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 ZEB2O60315 1214 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 CCDC122Q5T0U0 273 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 UBLCP1Q8WVY7 318 aaPredicted RBP12.95□□□□□ -0.34
VCL-202ENST00000372755 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
VCL-202ENST00000372755 CRCPO75575 148 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 GABPB2Q8TAK5 448 aaPredicted RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 KRT5P13647 590 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 POLD1P28340 1107 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 SMTNP53814 917 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 MYL5Q02045 173 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 ERCC6LQ2NKX8 1250 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
VCL-202ENST00000372755 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 TNRQ92752 1358 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 BIRC3Q13489 604 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 TNFAIP3P21580 790 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 LIN9Q5TKA1 542 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 SYT10Q6XYQ8 523 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 IL2RBP14784 551 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 SEPT6Q14141 434 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 STMN2Q93045 179 aa12.94□□□□□ -0.34
VCL-202ENST00000372755 RBM17Q96I25 401 aaKnown RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 BAG1Q99933 345 aaPredicted RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 NOC4LQ9BVI4 516 aaKnown RBP12.94□□□□□ -0.34
VCL-202ENST00000372755 PCF11O94913 1555 aaKnown RBP12.93□□□□□ -0.34
VCL-202ENST00000372755 E7EVH7 732 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 CALUO43852 315 aaPredicted RBP12.93□□□□□ -0.34
VCL-202ENST00000372755 TFCP2Q12800 502 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 TRAF5O00463 557 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 273.9 ms