RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 SYCE3A1L190 88 aa15.06■□□□□ 0
GPC3-201ENST00000370818 CTDNEP1O95476 244 aa15.06■□□□□ 0
GPC3-201ENST00000370818 SLC10A5Q5PT55 438 aa15.06■□□□□ 0
GPC3-201ENST00000370818 MB21D2Q8IYB1 491 aaPredicted RBP15.06■□□□□ 0
GPC3-201ENST00000370818 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
GPC3-201ENST00000370818 NSUN7Q8NE18 718 aaKnown RBP15.06■□□□□ 0
GPC3-201ENST00000370818 PRIMPOLQ96LW4 560 aa15.06■□□□□ 0
GPC3-201ENST00000370818 LLPHQ9BRT6 129 aaKnown RBP15.06■□□□□ 0
GPC3-201ENST00000370818 GPHNQ9NQX3 736 aaPredicted RBP15.06■□□□□ 0
GPC3-201ENST00000370818 WTIPA6NIX2 430 aaPredicted RBP15.05■□□□□ 0
GPC3-201ENST00000370818 ZNF213O14771 459 aa15.05■□□□□ 0
GPC3-201ENST00000370818 PDIA3P30101 505 aaKnown RBP15.05■□□□□ 0
GPC3-201ENST00000370818 EVCP57679 992 aa15.05■□□□□ 0
GPC3-201ENST00000370818 KIAA2012Q0VF49 1180 aa15.05■□□□□ 0
GPC3-201ENST00000370818 LRSAM1Q6UWE0 723 aa15.05■□□□□ 0
GPC3-201ENST00000370818 STRBPQ96SI9 672 aaKnown RBP15.05■□□□□ 0
GPC3-201ENST00000370818 ANTXR2P58335 489 aa15.05■□□□□ -0
GPC3-201ENST00000370818 UBE2HP62256 183 aa15.05■□□□□ -0
GPC3-201ENST00000370818 FAM173BQ6P4H8 233 aa15.05■□□□□ -0
GPC3-201ENST00000370818 ANKRD18AQ8IVF6 992 aa15.05■□□□□ -0
GPC3-201ENST00000370818 DDX11Q96FC9 970 aa15.05■□□□□ -0
GPC3-201ENST00000370818 ZNF274Q96GC6 653 aaPredicted RBP15.05■□□□□ -0
GPC3-201ENST00000370818 CCT2P78371 535 aaKnown RBP15.04■□□□□ -0
GPC3-201ENST00000370818 HMGN5P82970 282 aaKnown RBP15.04■□□□□ -0
GPC3-201ENST00000370818 MAGEB6Q8N7X4 407 aa15.04■□□□□ -0
GPC3-201ENST00000370818 NCOA5Q9HCD5 579 aaKnown RBP15.04■□□□□ -0
GPC3-201ENST00000370818 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
GPC3-201ENST00000370818 ONECUT3O60422 494 aaPredicted RBP15.04■□□□□ -0
GPC3-201ENST00000370818 MAP3K12Q12852 859 aa15.04■□□□□ -0
GPC3-201ENST00000370818 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
GPC3-201ENST00000370818 CELF1Q92879 486 aaKnown RBP15.04■□□□□ -0
GPC3-201ENST00000370818 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
GPC3-201ENST00000370818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.04■□□□□ -0
GPC3-201ENST00000370818 MEX3CQ5U5Q3 659 aaKnown RBP15.03■□□□□ -0
GPC3-201ENST00000370818 NCOA7Q8NI08 942 aa15.03■□□□□ -0
GPC3-201ENST00000370818 ARHGEF1Q92888 912 aaKnown RBP15.03■□□□□ -0
GPC3-201ENST00000370818 AIDAQ96BJ3 306 aa15.03■□□□□ -0
GPC3-201ENST00000370818 SETDB2Q96T68 719 aa15.03■□□□□ -0
GPC3-201ENST00000370818 MINPP1Q9UNW1 487 aa15.03■□□□□ -0
GPC3-201ENST00000370818 RTCBQ9Y3I0 505 aaKnown RBP15.03■□□□□ -0
GPC3-201ENST00000370818 ZNF804BA4D1E1 1349 aa15.03■□□□□ -0
GPC3-201ENST00000370818 AFF2P51816 1311 aa15.03■□□□□ -0
GPC3-201ENST00000370818 SALL1Q9NSC2 1324 aa15.03■□□□□ -0
GPC3-201ENST00000370818 PRC1O43663 620 aa15.03■□□□□ -0
GPC3-201ENST00000370818 ZPR1O75312 459 aa15.03■□□□□ -0
GPC3-201ENST00000370818 HSPA1LP34931 641 aa15.03■□□□□ -0
GPC3-201ENST00000370818 DNTTIP2Q5QJE6 756 aaKnown RBP15.03■□□□□ -0
GPC3-201ENST00000370818 TBC1D10CQ8IV04 446 aa15.03■□□□□ -0
GPC3-201ENST00000370818 DOCK2Q92608 1830 aa15.02■□□□□ -0
GPC3-201ENST00000370818 PTPDC1A2A3K4 754 aa15.02■□□□□ -0
GPC3-201ENST00000370818 APPP05067 770 aa15.02■□□□□ -0
GPC3-201ENST00000370818 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
GPC3-201ENST00000370818 NYXQ9GZU5 481 aa15.02■□□□□ -0
GPC3-201ENST00000370818 EPB41L4AQ9HCS5 686 aaPredicted RBP15.02■□□□□ -0
GPC3-201ENST00000370818 MBD4O95243 580 aa15.02□□□□□ -0.01
GPC3-201ENST00000370818 TTC6Q86TZ1 520 aa15.02□□□□□ -0.01
GPC3-201ENST00000370818 NBPF5PQ86XG9 351 aaPredicted RBP15.02□□□□□ -0.01
GPC3-201ENST00000370818 CERKQ8TCT0 537 aa15.02□□□□□ -0.01
GPC3-201ENST00000370818 TAF1P21675 1872 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 GYG1P46976 350 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 KRT85P78386 507 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 UBE4AQ14139 1066 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 RALYLQ86SE5 291 aaKnown RBP15.01□□□□□ -0.01
GPC3-201ENST00000370818 IQSEC3Q9UPP2 1182 aaPredicted RBP15.01□□□□□ -0.01
GPC3-201ENST00000370818 COL24A1Q17RW2 1714 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 WDR19Q8NEZ3 1342 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 RESTQ13127 1097 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 ALX1Q15699 326 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 CCDC24Q8N4L8 307 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 ARMT1Q9H993 441 aa15.01□□□□□ -0.01
GPC3-201ENST00000370818 ZMYM6O95789 1325 aa15□□□□□ -0.01
GPC3-201ENST00000370818 PATL2C9JE40 543 aaKnown RBP15□□□□□ -0.01
GPC3-201ENST00000370818 PPFIA3O75145 1194 aa15□□□□□ -0.01
GPC3-201ENST00000370818 IFNL3Q8IZI9 196 aa15□□□□□ -0.01
GPC3-201ENST00000370818 NLRP3Q96P20 1036 aa15□□□□□ -0.01
GPC3-201ENST00000370818 HPS5Q9UPZ3 1129 aa15□□□□□ -0.01
GPC3-201ENST00000370818 COL1A1P02452 1464 aaPredicted RBP15□□□□□ -0.01
GPC3-201ENST00000370818 LY75O60449 1722 aa15□□□□□ -0.01
GPC3-201ENST00000370818 CASZ1Q86V15 1759 aa15□□□□□ -0.01
GPC3-201ENST00000370818 KIF3AQ9Y496 699 aa15□□□□□ -0.01
GPC3-201ENST00000370818 ELP1O95163 1332 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 SPDYE4A6NLX3 237 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 H3BQV1 296 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 PTMAP06454 111 aaKnown RBP14.99□□□□□ -0.01
GPC3-201ENST00000370818 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
GPC3-201ENST00000370818 IFFO2Q5TF58 517 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 TPTE2Q6XPS3 522 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 LCORLQ8N3X6 602 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 RNF214Q8ND24 703 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 PIBF1Q8WXW3 757 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 LRRC4BQ9NT99 713 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 KLF18A0A0U1RQI7 1052 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 FDPSP14324 419 aaKnown RBP14.99□□□□□ -0.01
GPC3-201ENST00000370818 NOLC1Q14978 699 aaKnown RBP eCLIP14.99□□□□□ -0.011e-32■■□□□ 12.1
GPC3-201ENST00000370818 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 TAF3Q5VWG9 929 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms