RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 TIGD1Q96MW7 591 aa20.33■□□□□ 0.85
CHUK-201ENST00000370397 GCP02774 474 aa20.33■□□□□ 0.85
CHUK-201ENST00000370397 SLC3A2P08195 630 aaKnown RBP20.33■□□□□ 0.85
CHUK-201ENST00000370397 KIF23Q02241 960 aaPredicted RBP20.33■□□□□ 0.85
CHUK-201ENST00000370397 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
CHUK-201ENST00000370397 RGS22Q8NE09 1264 aa20.33■□□□□ 0.85
CHUK-201ENST00000370397 BMP6P22004 513 aa20.33■□□□□ 0.84
CHUK-201ENST00000370397 VSTM4Q8IW00 320 aa20.33■□□□□ 0.84
CHUK-201ENST00000370397 GPR108Q9NPR9 543 aa20.33■□□□□ 0.84
CHUK-201ENST00000370397 MST1RQ04912 1400 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 LMOD1P29536 600 aaPredicted RBP20.32■□□□□ 0.84
CHUK-201ENST00000370397 PTPAQ15257 358 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 ERICH4A6NGS2 130 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 POLR3DP05423 398 aaPredicted RBP20.32■□□□□ 0.84
CHUK-201ENST00000370397 RSRC2Q7L4I2 434 aaKnown RBP20.32■□□□□ 0.84
CHUK-201ENST00000370397 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
CHUK-201ENST00000370397 OSBP2Q969R2 916 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 KIFC2Q96AC6 838 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
CHUK-201ENST00000370397 DNAI1Q9UI46 699 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 EFCAB8A8MWE9 144 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 TMEM232C9JQI7 657 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 HNRNPH2P55795 449 aaKnown RBP20.32■□□□□ 0.84
CHUK-201ENST00000370397 SHC4Q6S5L8 630 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 BRAPQ7Z569 592 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 C14orf37Q86TY3 774 aa20.32■□□□□ 0.84
CHUK-201ENST00000370397 DHX8Q14562 1220 aaKnown RBP20.31■□□□□ 0.84
CHUK-201ENST00000370397 MAP3K14Q99558 947 aa20.31■□□□□ 0.84
CHUK-201ENST00000370397 MEGF6O75095 1541 aa20.31■□□□□ 0.84
CHUK-201ENST00000370397 SEC31AO94979 1220 aaKnown RBP20.31■□□□□ 0.84
CHUK-201ENST00000370397 FCHSD1Q86WN1 690 aa20.31■□□□□ 0.84
CHUK-201ENST00000370397 GOLGA8FQ08AF8 430 aa20.31■□□□□ 0.84
CHUK-201ENST00000370397 GOLGA8DPQ0D2H9 430 aa20.31■□□□□ 0.84
CHUK-201ENST00000370397 ANO1Q5XXA6 986 aa20.31■□□□□ 0.84
CHUK-201ENST00000370397 CDC27P30260 824 aa20.3■□□□□ 0.84
CHUK-201ENST00000370397 MAP3K9P80192 1104 aa20.3■□□□□ 0.84
CHUK-201ENST00000370397 SLC39A14Q15043 492 aa20.3■□□□□ 0.84
CHUK-201ENST00000370397 EPC1Q9H2F5 836 aa20.3■□□□□ 0.84
CHUK-201ENST00000370397 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
CHUK-201ENST00000370397 CCDC158Q5M9N0 1113 aa20.3■□□□□ 0.84
CHUK-201ENST00000370397 BBXQ8WY36 941 aaPredicted RBP20.3■□□□□ 0.84
CHUK-201ENST00000370397 NBPF3Q9H094 633 aa20.3■□□□□ 0.84
CHUK-201ENST00000370397 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
CHUK-201ENST00000370397 PAPPAQ13219 1627 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 RNF113AO15541 343 aaKnown RBP20.29■□□□□ 0.84
CHUK-201ENST00000370397 ATP8B1O43520 1251 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 STK38Q15208 465 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 WDR24Q96S15 920 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 STRCQ7RTU9 1775 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 H7C1W4 665 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 TIMM10P62072 90 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 CC2D1AQ6P1N0 951 aaPredicted RBP20.29■□□□□ 0.84
CHUK-201ENST00000370397 METTL16Q86W50 562 aaKnown RBP20.29■□□□□ 0.84
CHUK-201ENST00000370397 SRRTQ9BXP5 876 aaKnown RBP20.29■□□□□ 0.84
CHUK-201ENST00000370397 CALCOCO1Q9P1Z2 691 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 LRP6O75581 1613 aa20.29■□□□□ 0.84
CHUK-201ENST00000370397 MDM2Q00987 491 aaPredicted RBP20.28■□□□□ 0.84
CHUK-201ENST00000370397 ST5P78524 1137 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 PTPN21Q16825 1174 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 C8orf76Q96K31 380 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 CARD6Q9BX69 1037 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 CPDO75976 1380 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 LMBR1LQ6UX01 489 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 MRFAP1Q9Y605 127 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 CHD4Q14839 1912 aa20.28■□□□□ 0.84
CHUK-201ENST00000370397 PDE4BQ07343 736 aa20.27■□□□□ 0.84
CHUK-201ENST00000370397 FMNL2Q96PY5 1086 aa20.27■□□□□ 0.84
CHUK-201ENST00000370397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.27■□□□□ 0.84
CHUK-201ENST00000370397 UTP14AQ9BVJ6 771 aaKnown RBP20.27■□□□□ 0.84
CHUK-201ENST00000370397 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.83
CHUK-201ENST00000370397 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.83
CHUK-201ENST00000370397 MED15Q96RN5 788 aa20.27■□□□□ 0.83
CHUK-201ENST00000370397 PPP2R2CQ9Y2T4 447 aa20.27■□□□□ 0.83
CHUK-201ENST00000370397 A0A087WZG4 1122 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 ISM2Q6H9L7 571 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 MYL5Q02045 173 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 RESP18Q5W5W9 173 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 SMARCE1Q969G3 411 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 PPP6R2O75170 966 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 PHKG2P15735 406 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 UBASH3AP57075 661 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 PNOCQ13519 176 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 TC2NQ8N9U0 490 aa20.26■□□□□ 0.83
CHUK-201ENST00000370397 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 ZNF18P17022 549 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 LRRC24Q50LG9 513 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 UBXN4Q92575 508 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 FUT8Q9BYC5 575 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 CCP110O43303 1012 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 AIFM3Q96NN9 605 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 TMCO3Q6UWJ1 677 aa20.25■□□□□ 0.83
CHUK-201ENST00000370397 ZCCHC17Q9NP64 241 aaKnown RBP20.24■□□□□ 0.83
CHUK-201ENST00000370397 FANCLQ9NW38 375 aa20.24■□□□□ 0.83
CHUK-201ENST00000370397 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
CHUK-201ENST00000370397 FGAP02671 866 aa20.24■□□□□ 0.83
CHUK-201ENST00000370397 SF3A1Q15459 793 aaKnown RBP20.24■□□□□ 0.83
CHUK-201ENST00000370397 GORABQ5T7V8 394 aa20.24■□□□□ 0.83
CHUK-201ENST00000370397 KLF18A0A0U1RQI7 1052 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 ARHGAP6O43182 974 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms