RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 USP50Q70EL3 339 aaPredicted RBP18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 PLEKHM2Q8IWE5 1019 aa18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 TAF1DQ9H5J8 278 aaPredicted RBP18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 NMRK2Q9NPI5 230 aa18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 LRP2BPQ9P2M1 347 aa18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 SERPINA10Q9UK55 444 aa18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 F8W031 263 aaPredicted RBP18.89■□□□□ 0.62
PRPF38B-202ENST00000370022 MYOZ2Q9NPC6 264 aa18.89■□□□□ 0.62
PRPF38B-202ENST00000370022 PAG1Q9NWQ8 432 aa18.89■□□□□ 0.62
PRPF38B-202ENST00000370022 GRIK5Q16478 980 aa18.89■□□□□ 0.61
PRPF38B-202ENST00000370022 TSHZ3Q63HK5 1081 aa18.89■□□□□ 0.61
PRPF38B-202ENST00000370022 TBC1D9Q6ZT07 1266 aa18.89■□□□□ 0.61
PRPF38B-202ENST00000370022 DZIP1Q86YF9 867 aaKnown RBP18.89■□□□□ 0.61
PRPF38B-202ENST00000370022 SLF2Q8IX21 1173 aa18.89■□□□□ 0.61
PRPF38B-202ENST00000370022 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
PRPF38B-202ENST00000370022 GOLIM4O00461 696 aa18.88■□□□□ 0.61
PRPF38B-202ENST00000370022 HHIPL2Q6UWX4 724 aa18.88■□□□□ 0.61
PRPF38B-202ENST00000370022 TEKT1Q969V4 418 aa18.88■□□□□ 0.61
PRPF38B-202ENST00000370022 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
PRPF38B-202ENST00000370022 SHTN1A0MZ66 631 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 PDE4AP27815 886 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 GSTO1P78417 241 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 MAP3K12Q12852 859 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 KIF4BQ2VIQ3 1234 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 ANTXR1Q9H6X2 564 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 PIH1D3Q9NQM4 214 aaKnown RBP18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 NDUFB9Q9Y6M9 179 aa18.87■□□□□ 0.61
PRPF38B-202ENST00000370022 CRKP46108 304 aa18.86■□□□□ 0.61
PRPF38B-202ENST00000370022 DLGAP5Q15398 846 aa18.86■□□□□ 0.61
PRPF38B-202ENST00000370022 SAMD7Q7Z3H4 446 aa18.86■□□□□ 0.61
PRPF38B-202ENST00000370022 NSUN4Q96CB9 384 aaKnown RBP18.86■□□□□ 0.61
PRPF38B-202ENST00000370022 IDH1O75874 414 aaKnown RBP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 LDHCP07864 332 aa18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 MECOMQ03112 1051 aa18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 CFAP100Q494V2 611 aa18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 TBC1D10BQ4KMP7 808 aaPredicted RBP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 FAM163AQ96GL9 167 aaPredicted RBP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 ZDHHC15Q96MV8 337 aa18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 RBM5P52756 815 aaKnown RBP eCLIP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 RBM26Q5T8P6 1007 aaKnown RBP18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
PRPF38B-202ENST00000370022 WNT10BO00744 389 aa18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 KIF3CO14782 793 aa18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 MYO1BO43795 1136 aa18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 KBTBD3Q8NAB2 608 aa18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 ZBED3Q96IU2 234 aaPredicted RBP18.84■□□□□ 0.61
PRPF38B-202ENST00000370022 SPDYE2BA6NHP3 402 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 EGFRP00533 1210 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 SPDYE6P0CI01 402 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 HIRAP54198 1017 aaPredicted RBP18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 DIXDC1Q155Q3 683 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 NAA16Q6N069 864 aaPredicted RBP18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 LDHDQ86WU2 507 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 TICAM2Q86XR7 235 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 EVI5LQ96CN4 794 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 EDC3Q96F86 508 aaKnown RBP18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 MAST2Q6P0Q8 1798 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 MROH7-TTC4A0A0A0MT08 1334 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 GAKO14976 1311 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 DOCK2Q92608 1830 aa18.83■□□□□ 0.6
PRPF38B-202ENST00000370022 ZNF384Q8TF68 577 aa18.82■□□□□ 0.6
PRPF38B-202ENST00000370022 DAGLAQ9Y4D2 1042 aa18.82■□□□□ 0.6
PRPF38B-202ENST00000370022 SLC9C2Q5TAH2 1124 aa18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 PRMT6Q96LA8 375 aaPredicted RBP18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 PGAP2Q9UHJ9 254 aa18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 NBPF9Q3BBW0 867 aa18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
PRPF38B-202ENST00000370022 ADAMTSL1Q8N6G6 1762 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 GPR75-ASB3A0A0A6YYF3 556 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 TOMM70O94826 608 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 MAP4K4O95819 1239 aaPredicted RBP18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 ZFYP08048 801 aaPredicted RBP18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 PDE6AP16499 860 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 C1QTNF8P60827 252 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 UBE3CQ15386 1083 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 TTC22Q5TAA0 569 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 CERS3Q8IU89 383 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 NOL10Q9BSC4 688 aaKnown RBP18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 PITPNM2Q9BZ72 1349 aa18.8■□□□□ 0.6
PRPF38B-202ENST00000370022 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
PRPF38B-202ENST00000370022 BAG3O95817 575 aa18.79■□□□□ 0.6
PRPF38B-202ENST00000370022 CYP7A1P22680 504 aa18.79■□□□□ 0.6
PRPF38B-202ENST00000370022 ADD2P35612 726 aa18.79■□□□□ 0.6
PRPF38B-202ENST00000370022 FSD1Q9BTV5 496 aa18.79■□□□□ 0.6
PRPF38B-202ENST00000370022 RFX7Q2KHR2 1363 aa18.79■□□□□ 0.6
PRPF38B-202ENST00000370022 BTDP43251 543 aa18.78■□□□□ 0.6
PRPF38B-202ENST00000370022 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
PRPF38B-202ENST00000370022 RBM46Q8TBY0 533 aaKnown RBP18.78■□□□□ 0.6
PRPF38B-202ENST00000370022 DCPSQ96C86 337 aaKnown RBP18.78■□□□□ 0.6
PRPF38B-202ENST00000370022 GGA3Q9NZ52 723 aa18.78■□□□□ 0.6
PRPF38B-202ENST00000370022 PCDHAC2Q9Y5I4 1007 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms