RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 DDX17Q92841 729 aaKnown RBP13.34□□□□□ -0.27
COPA-202ENST00000368069 NR1I2O75469 434 aa13.33□□□□□ -0.27
COPA-202ENST00000368069 KRT2P35908 639 aa13.33□□□□□ -0.27
COPA-202ENST00000368069 ZAP70P43403 619 aa13.33□□□□□ -0.27
COPA-202ENST00000368069 MAP4K1Q92918 833 aa13.33□□□□□ -0.27
COPA-202ENST00000368069 TMEM87BQ96K49 555 aa13.33□□□□□ -0.27
COPA-202ENST00000368069 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 CCDC175P0C221 793 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 KARSQ15046 597 aaKnown RBP13.33□□□□□ -0.28
COPA-202ENST00000368069 FAM114A1Q8IWE2 563 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
COPA-202ENST00000368069 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 PHKG2P15735 406 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 EXOC1Q9NV70 894 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
COPA-202ENST00000368069 PAFAH1B1P43034 410 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 ARMT1Q9H993 441 aa13.33□□□□□ -0.28
COPA-202ENST00000368069 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
COPA-202ENST00000368069 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 ZNF202O95125 648 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 CABP5Q9NP86 173 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 ARFGAP3Q9NP61 516 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 KCNH3Q9ULD8 1083 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 CALM1P0DP23 149 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 CALM2P0DP24 149 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 CALM3P0DP25 149 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 CCDC40Q4G0X9 1142 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 SLF2Q8IX21 1173 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 PHKBQ93100 1093 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
COPA-202ENST00000368069 NSFL1CQ9UNZ2 370 aaKnown RBP13.32□□□□□ -0.28
COPA-202ENST00000368069 C6orf229H3BNL8 230 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 HAUS7Q99871 368 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 FANCCQ00597 558 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
COPA-202ENST00000368069 TSC1Q92574 1164 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 TAF5LO75529 589 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 KRT40Q6A162 431 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 LZTFL1Q9NQ48 299 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 JADE2Q9NQC1 790 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 DBNLQ9UJU6 430 aaKnown RBP13.31□□□□□ -0.28
COPA-202ENST00000368069 PFKFB2O60825 505 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 CEP152O94986 1710 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 RILPL1Q5EBL4 403 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 ALS2CR12Q96Q35 445 aa13.31□□□□□ -0.28
COPA-202ENST00000368069 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.31□□□□□ -0.28
COPA-202ENST00000368069 PPP1R12BO60237 982 aaPredicted RBP13.3□□□□□ -0.28
COPA-202ENST00000368069 SPECC1Q5M775 1068 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 COPRSQ9NQ92 184 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 PSMA7O14818 248 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 IGSF3O75054 1194 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 MCM7P33993 719 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 LMAN1P49257 510 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 GNAQP50148 359 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 POLA2Q14181 598 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 TTLL7Q6ZT98 887 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
COPA-202ENST00000368069 PI4K2BQ8TCG2 481 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 NLRP12P59046 1061 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 ERO1AQ96HE7 468 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 BAG1Q99933 345 aaPredicted RBP13.3□□□□□ -0.28
COPA-202ENST00000368069 ALKQ9UM73 1620 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 KIF20AO95235 890 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 LARGE1O95461 756 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 HSPD1P10809 573 aaKnown RBP13.3□□□□□ -0.28
COPA-202ENST00000368069 DDB1Q16531 1140 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
COPA-202ENST00000368069 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
COPA-202ENST00000368069 AKR1B10O60218 316 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 GSTO1P78417 241 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
COPA-202ENST00000368069 ADCY9O60503 1353 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 MED14O60244 1454 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 PDE8AO60658 829 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 CUTAO60888 179 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 DEXIO95424 95 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 CALML3P27482 149 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 ZNF174Q15697 407 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 MYSM1Q5VVJ2 828 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 GOLGA1Q92805 767 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 VWA3AA6NCI4 1184 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 CYLC1P35663 651 aaPredicted RBP13.29□□□□□ -0.28
COPA-202ENST00000368069 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.289e-6■■■■□ 21.7
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms