RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 EIF4A1P60842 406 aaKnown RBP15.57■□□□□ 0.08
VCP-201ENST00000358901 KRT83P78385 493 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 TRPM2O94759 1503 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 GPAA1O43292 621 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 SYCP3Q8IZU3 236 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 APPBP2Q92624 585 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 GTPBP4Q9BZE4 634 aaKnown RBP15.57■□□□□ 0.08
VCP-201ENST00000358901 HSF2BPO75031 334 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 CALM1P0DP23 149 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 CALM2P0DP24 149 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 CALM3P0DP25 149 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 FANCCQ00597 558 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 PTH1RQ03431 593 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 RILPL1Q5EBL4 403 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 PLEKHF1Q96S99 279 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 PPP1R9BQ96SB3 815 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
VCP-201ENST00000358901 GPT2Q8TD30 523 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 TBCAO75347 108 aaKnown RBP15.56■□□□□ 0.08
VCP-201ENST00000358901 ZNF202O95125 648 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 HLA-DOAP06340 250 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 ZNF174Q15697 407 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 TAOK3Q9H2K8 898 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 A1BGP04217 495 aa15.56■□□□□ 0.08
VCP-201ENST00000358901 EZRP15311 586 aaKnown RBP15.56■□□□□ 0.08
VCP-201ENST00000358901 DIS3L2Q8IYB7 885 aaKnown RBP15.56■□□□□ 0.08
VCP-201ENST00000358901 AKR1B15C9JRZ8 316 aaPredicted RBP15.55■□□□□ 0.08
VCP-201ENST00000358901 DTHD1Q6ZMT9 781 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 GIMAP7Q8NHV1 300 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
VCP-201ENST00000358901 GCOM1H8Y6P7 765 aaPredicted RBP15.55■□□□□ 0.08
VCP-201ENST00000358901 MYZAPP0CAP1 466 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 CNGA4Q8IV77 575 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 XAGE2Q96GT9 111 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 ZNF496Q96IT1 587 aaPredicted RBP15.55■□□□□ 0.08
VCP-201ENST00000358901 C19orf44Q9H6X5 657 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 KIF24Q5T7B8 1368 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 SMC1AQ14683 1233 aaKnown RBP15.55■□□□□ 0.08
VCP-201ENST00000358901 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 ANTXR1Q9H6X2 564 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 RTL9Q8NET4 1388 aa15.55■□□□□ 0.08
VCP-201ENST00000358901 GOLGA6L10A0A0M3HER8 536 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 POLR2DO15514 142 aaKnown RBP15.54■□□□□ 0.08
VCP-201ENST00000358901 RFC4P35249 363 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 PPP2R3AQ06190 1150 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 MYL10Q9BUA6 226 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 VPS18Q9P253 973 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 JAG2Q9Y219 1238 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 SAMM50Q9Y512 469 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 KCNQ3O43525 872 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 TERF1P54274 439 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 GSTO1P78417 241 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 IGSF22Q8N9C0 903 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 PHKBQ93100 1093 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 TMEM87BQ96K49 555 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 F8W031 263 aaPredicted RBP15.54■□□□□ 0.08
VCP-201ENST00000358901 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 IFI16Q16666 785 aaKnown RBP15.54■□□□□ 0.08
VCP-201ENST00000358901 KIAA0753Q2KHM9 967 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 STXBP4Q6ZWJ1 553 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 VPS16Q9H269 839 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 C6orf50Q9HD87 102 aa15.54■□□□□ 0.08
VCP-201ENST00000358901 CFAP65Q6ZU64 1925 aaKnown RBP15.53■□□□□ 0.08
VCP-201ENST00000358901 A0A0D9SFI3 127 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 ELF2Q15723 593 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 ATRIPQ8WXE1 791 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 MAPK8IP1Q9UQF2 711 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 ITGA6P23229 1130 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 KDM6BO15054 1643 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 FSD2A1L4K1 749 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 PRDM1O75626 825 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 TNNI2P48788 182 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 ERMNQ8TAM6 284 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 TPCN1Q9ULQ1 816 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 NFE2L3Q9Y4A8 694 aa15.53■□□□□ 0.08
VCP-201ENST00000358901 ATP2C2O75185 946 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 DESP17661 470 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 SAMD9Q5K651 1589 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 IVLP07476 585 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 ATP5JP18859 108 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 CCDC122Q5T0U0 273 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 KRT40Q6A162 431 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 RASEFQ8IZ41 740 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 ARMT1Q9H993 441 aa15.52■□□□□ 0.08
VCP-201ENST00000358901 CALRP27797 417 aaKnown RBP15.52■□□□□ 0.07
VCP-201ENST00000358901 LRMPQ12912 555 aa15.52■□□□□ 0.07
VCP-201ENST00000358901 TTC6Q86TZ1 520 aa15.52■□□□□ 0.07
VCP-201ENST00000358901 IPO4Q8TEX9 1081 aaKnown RBP15.52■□□□□ 0.07
VCP-201ENST00000358901 V9GY48 417 aaPredicted RBP15.52■□□□□ 0.07
VCP-201ENST00000358901 DEXIO95424 95 aa15.52■□□□□ 0.07
VCP-201ENST00000358901 PICALMQ13492 652 aa15.52■□□□□ 0.07
VCP-201ENST00000358901 HOOK3Q86VS8 718 aa15.52■□□□□ 0.07
VCP-201ENST00000358901 ATP7AQ04656 1500 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms