RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 CUTAO60888 179 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 CEBPAP49715 358 aaPredicted RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 FANCAO15360 1455 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 INPP5BP32019 993 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 ADD1P35611 737 aaKnown RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
CNOT3-202ENST00000358389 SUFUQ9UMX1 484 aa13.06□□□□□ -0.32
CNOT3-202ENST00000358389 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 RAD21O60216 631 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 MARCH6O60337 910 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 CHGBP05060 677 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
CNOT3-202ENST00000358389 CCDC148Q8NFR7 591 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 TAF5LO75529 589 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 ZMYND10O75800 440 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
CNOT3-202ENST00000358389 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 VWDEQ8N2E2 1590 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 ADCY9O60503 1353 aa13.05□□□□□ -0.32
CNOT3-202ENST00000358389 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 MAP2K7O14733 419 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 STX10O60499 249 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 ZC3H6P61129 1189 aaKnown RBP13.04□□□□□ -0.32
CNOT3-202ENST00000358389 NCAPHQ15003 741 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 LINC00301Q8NCQ3 95 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 NOC3LQ8WTT2 800 aaKnown RBP13.04□□□□□ -0.32
CNOT3-202ENST00000358389 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
CNOT3-202ENST00000358389 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 CAPN7Q9Y6W3 813 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 CYP21A2P08686 494 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
CNOT3-202ENST00000358389 SPECC1LQ69YQ0 1117 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 DHX32Q7L7V1 743 aaKnown RBP13.04□□□□□ -0.32
CNOT3-202ENST00000358389 BCAS4Q8TDM0 211 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 CAPZA3Q96KX2 299 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 ZFYVE16Q7Z3T8 1539 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 G3V3G9 751 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 ATL3Q6DD88 541 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 FAM76AQ8TAV0 307 aa13.04□□□□□ -0.32
CNOT3-202ENST00000358389 PLEKHO1Q53GL0 409 aaPredicted RBP13.03□□□□□ -0.32
CNOT3-202ENST00000358389 SLC35F6Q8N357 371 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 RUFY1Q96T51 708 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
CNOT3-202ENST00000358389 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 L1RE1Q9UN81 338 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 CAMSAP1Q5T5Y3 1602 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 IKBKBO14920 756 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 PFKFB2O60825 505 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 KCNB2Q92953 911 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
CNOT3-202ENST00000358389 MAP3K2Q9Y2U5 619 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 FAM169AQ9Y6X4 670 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 PSEN1P49768 467 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 HAND2P61296 217 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 PPARDQ03181 441 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
CNOT3-202ENST00000358389 FKBP15Q5T1M5 1219 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 CCDC102BQ68D86 513 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 ASXL2Q76L83 1435 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
CNOT3-202ENST00000358389 MAP9Q49MG5 647 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■□□□ 11.5
CNOT3-202ENST00000358389 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
CNOT3-202ENST00000358389 A0A1W2PQ27 194 aa13.02□□□□□ -0.32
CNOT3-202ENST00000358389 A0A1W2PQ64 194 aa13.02□□□□□ -0.32
CNOT3-202ENST00000358389 A0A1W2PQD8 194 aa13.02□□□□□ -0.32
CNOT3-202ENST00000358389 STX17P56962 302 aa13.02□□□□□ -0.32
CNOT3-202ENST00000358389 ANO1Q5XXA6 986 aa13.02□□□□□ -0.32
CNOT3-202ENST00000358389 VPS37DQ86XT2 251 aa13.02□□□□□ -0.32
CNOT3-202ENST00000358389 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 STIM1Q13586 685 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 GOLGA6CA6NDK9 693 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 LRRIQ3A6PVS8 624 aaPredicted RBP13.02□□□□□ -0.33
CNOT3-202ENST00000358389 GOLGA6DP0CG33 693 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 HNRNPH1P31943 449 aaKnown RBP13.02□□□□□ -0.33
CNOT3-202ENST00000358389 PPP2R5AQ15172 486 aa13.02□□□□□ -0.33
CNOT3-202ENST00000358389 MYSM1Q5VVJ2 828 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms