RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RILPL2Q969X0 211 aa18.49■□□□□ 0.55
TPM1-206ENST00000358278 GSPT1P15170 499 aaKnown RBP18.48■□□□□ 0.55
TPM1-206ENST00000358278 MAP3K12Q12852 859 aa18.48■□□□□ 0.55
TPM1-206ENST00000358278 GRIK5Q16478 980 aa18.48■□□□□ 0.55
TPM1-206ENST00000358278 OGFOD1Q8N543 542 aa18.48■□□□□ 0.55
TPM1-206ENST00000358278 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
TPM1-206ENST00000358278 FSD1Q9BTV5 496 aa18.48■□□□□ 0.55
TPM1-206ENST00000358278 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.55
TPM1-206ENST00000358278 KBTBD3Q8NAB2 608 aa18.47■□□□□ 0.55
TPM1-206ENST00000358278 DPF2Q92785 391 aa18.47■□□□□ 0.55
TPM1-206ENST00000358278 GMLQ99445 158 aa18.47■□□□□ 0.55
TPM1-206ENST00000358278 HDAC9Q9UKV0 1011 aa18.47■□□□□ 0.55
TPM1-206ENST00000358278 USP17L8P0C7I0 530 aa18.46■□□□□ 0.55
TPM1-206ENST00000358278 LMOD1P29536 600 aaPredicted RBP18.46■□□□□ 0.55
TPM1-206ENST00000358278 SCNN1DP51172 638 aa18.46■□□□□ 0.55
TPM1-206ENST00000358278 MECOMQ03112 1051 aa18.46■□□□□ 0.55
TPM1-206ENST00000358278 MICALL2Q8IY33 904 aa18.46■□□□□ 0.55
TPM1-206ENST00000358278 LRRFIP1Q32MZ4 808 aaKnown RBP18.45■□□□□ 0.54
TPM1-206ENST00000358278 SLC9C2Q5TAH2 1124 aa18.45■□□□□ 0.54
TPM1-206ENST00000358278 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
TPM1-206ENST00000358278 MAGEB6Q8N7X4 407 aa18.45■□□□□ 0.54
TPM1-206ENST00000358278 GPRC5DQ9NZD1 345 aa18.45■□□□□ 0.54
TPM1-206ENST00000358278 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
TPM1-206ENST00000358278 CDK5RAP2Q96SN8 1893 aa18.45■□□□□ 0.54
TPM1-206ENST00000358278 IGSF3O75054 1194 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 SDSP20132 328 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 GSTO1P78417 241 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 SLF2Q8IX21 1173 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 TEKT1Q969V4 418 aa18.44■□□□□ 0.54
TPM1-206ENST00000358278 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
TPM1-206ENST00000358278 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
TPM1-206ENST00000358278 H7C1D1 291 aa18.43■□□□□ 0.54
TPM1-206ENST00000358278 MMP14P50281 582 aa18.43■□□□□ 0.54
TPM1-206ENST00000358278 RBM5P52756 815 aaKnown RBP eCLIP18.43■□□□□ 0.54
TPM1-206ENST00000358278 POLR2AP24928 1970 aaKnown RBP18.43■□□□□ 0.54
TPM1-206ENST00000358278 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
TPM1-206ENST00000358278 PDE6AP16499 860 aa18.43■□□□□ 0.54
TPM1-206ENST00000358278 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
TPM1-206ENST00000358278 SERPINA10Q9UK55 444 aa18.43■□□□□ 0.54
TPM1-206ENST00000358278 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
TPM1-206ENST00000358278 IQCA1LA6NCM1 817 aa18.42■□□□□ 0.54
TPM1-206ENST00000358278 CRKP46108 304 aa18.42■□□□□ 0.54
TPM1-206ENST00000358278 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
TPM1-206ENST00000358278 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
TPM1-206ENST00000358278 MYOZ2Q9NPC6 264 aa18.42■□□□□ 0.54
TPM1-206ENST00000358278 FOCADQ5VW36 1801 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 ZNF532Q9HCE3 1301 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 LDHCP07864 332 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 ZFYP08048 801 aaPredicted RBP18.41■□□□□ 0.54
TPM1-206ENST00000358278 CYP7A1P22680 504 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 ADD2P35612 726 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 EPS15P42566 896 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 ZNF280AP59817 542 aaPredicted RBP18.41■□□□□ 0.54
TPM1-206ENST00000358278 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
TPM1-206ENST00000358278 HACL1Q9UJ83 578 aa18.41■□□□□ 0.54
TPM1-206ENST00000358278 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
TPM1-206ENST00000358278 DLGAP5Q15398 846 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 CFAP100Q494V2 611 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 HHIPL2Q6UWX4 724 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 NOL10Q9BSC4 688 aaKnown RBP18.4■□□□□ 0.54
TPM1-206ENST00000358278 KIF4BQ2VIQ3 1234 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 TBC1D10BQ4KMP7 808 aaPredicted RBP18.4■□□□□ 0.54
TPM1-206ENST00000358278 RBM26Q5T8P6 1007 aaKnown RBP18.4■□□□□ 0.54
TPM1-206ENST00000358278 SAMD7Q7Z3H4 446 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 MRIQ9BWK5 157 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 ADARB2Q9NS39 739 aaKnown RBP18.4■□□□□ 0.54
TPM1-206ENST00000358278 DIAPH3Q9NSV4 1193 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 DAGLAQ9Y4D2 1042 aa18.4■□□□□ 0.54
TPM1-206ENST00000358278 GAKO14976 1311 aa18.39■□□□□ 0.53
TPM1-206ENST00000358278 CHGBP05060 677 aa18.39■□□□□ 0.53
TPM1-206ENST00000358278 UBE3CQ15386 1083 aa18.39■□□□□ 0.53
TPM1-206ENST00000358278 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
TPM1-206ENST00000358278 TCRBV5S4A2TA0A5A2 114 aa18.38■□□□□ 0.53
TPM1-206ENST00000358278 HIP1O00291 1037 aa18.38■□□□□ 0.53
TPM1-206ENST00000358278 SLFNL1Q499Z3 407 aa18.38■□□□□ 0.53
TPM1-206ENST00000358278 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
TPM1-206ENST00000358278 ZDHHC15Q96MV8 337 aa18.38■□□□□ 0.53
TPM1-206ENST00000358278 PCDHAC2Q9Y5I4 1007 aa18.38■□□□□ 0.53
TPM1-206ENST00000358278 SPDYE2BA6NHP3 402 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 EGFRP00533 1210 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 SPDYE6P0CI01 402 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 YY1P25490 414 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 EPHX2P34913 555 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 MIGA1Q8NAN2 632 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 MTMR14Q8NCE2 650 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 APPBP2Q92624 585 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
TPM1-206ENST00000358278 RRAGCQ9HB90 399 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
TPM1-206ENST00000358278 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 MYH1P12882 1939 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
TPM1-206ENST00000358278 MYO1BO43795 1136 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 BAG3O95817 575 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 VEGFAP15692 232 aaPredicted RBP18.37■□□□□ 0.53
TPM1-206ENST00000358278 BTDP43251 543 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms