RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 B4E1Z4 1266 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 GNPATO15228 680 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 ELP1O95163 1332 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 RXRAP19793 462 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
MBD1-205ENST00000353909 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
MBD1-205ENST00000353909 CAMK4Q16566 473 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 LAMB2P55268 1798 aa18.29■□□□□ 0.52
MBD1-205ENST00000353909 NEDD4P46934 1319 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 ADGRA1Q86SQ6 560 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 LCORLQ8N3X6 602 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 SCAND2PQ9GZW5 306 aaPredicted RBP18.28■□□□□ 0.52
MBD1-205ENST00000353909 CARMIL3Q8ND23 1372 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
MBD1-205ENST00000353909 CTDSPL2Q05D32 466 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 STK11IPQ8N1F8 1099 aa18.28■□□□□ 0.52
MBD1-205ENST00000353909 CDC5LQ99459 802 aaKnown RBP18.28■□□□□ 0.52
MBD1-205ENST00000353909 SF3B3Q15393 1217 aaKnown RBP18.27■□□□□ 0.52
MBD1-205ENST00000353909 IFNL3Q8IZI9 196 aa18.27■□□□□ 0.52
MBD1-205ENST00000353909 BTAF1O14981 1849 aa18.27■□□□□ 0.52
MBD1-205ENST00000353909 DOCK2Q92608 1830 aa18.27■□□□□ 0.52
MBD1-205ENST00000353909 KLRK1P26718 216 aa18.27■□□□□ 0.52
MBD1-205ENST00000353909 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
MBD1-205ENST00000353909 SLC51AQ86UW1 340 aa18.27■□□□□ 0.52
MBD1-205ENST00000353909 ABCF2Q9UG63 623 aa18.27■□□□□ 0.52
MBD1-205ENST00000353909 GSG1L2A8MUP6 293 aa18.27■□□□□ 0.51
MBD1-205ENST00000353909 FUCA2Q9BTY2 467 aa18.27■□□□□ 0.51
MBD1-205ENST00000353909 DACT1Q9NYF0 836 aa18.27■□□□□ 0.51
MBD1-205ENST00000353909 LRP2BPQ9P2M1 347 aa18.27■□□□□ 0.51
MBD1-205ENST00000353909 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.51
MBD1-205ENST00000353909 MINPP1Q9UNW1 487 aa18.27■□□□□ 0.51
MBD1-205ENST00000353909 CASZ1Q86V15 1759 aa18.27■□□□□ 0.51
MBD1-205ENST00000353909 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
MBD1-205ENST00000353909 TRDNQ13061 729 aa18.26■□□□□ 0.51
MBD1-205ENST00000353909 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
MBD1-205ENST00000353909 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
MBD1-205ENST00000353909 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
MBD1-205ENST00000353909 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
MBD1-205ENST00000353909 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
MBD1-205ENST00000353909 COL1A1P02452 1464 aaPredicted RBP18.25■□□□□ 0.51
MBD1-205ENST00000353909 USP28Q96RU2 1077 aa18.25■□□□□ 0.51
MBD1-205ENST00000353909 NAPBQ9H115 298 aa18.25■□□□□ 0.51
MBD1-205ENST00000353909 ZSCAN16Q9H4T2 348 aaPredicted RBP18.25■□□□□ 0.51
MBD1-205ENST00000353909 CCDC144CPQ8IYA2 1237 aa18.25■□□□□ 0.51
MBD1-205ENST00000353909 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
MBD1-205ENST00000353909 GOLGA6L4A6NEF3 574 aa18.24■□□□□ 0.51
MBD1-205ENST00000353909 ARHGEF1Q92888 912 aaKnown RBP18.24■□□□□ 0.51
MBD1-205ENST00000353909 SETDB2Q96T68 719 aa18.24■□□□□ 0.51
MBD1-205ENST00000353909 ANGEL1Q9UNK9 670 aaKnown RBP18.24■□□□□ 0.51
MBD1-205ENST00000353909 ZNF831Q5JPB2 1677 aa18.24■□□□□ 0.51
MBD1-205ENST00000353909 NR1I2O75469 434 aa18.24■□□□□ 0.51
MBD1-205ENST00000353909 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
MBD1-205ENST00000353909 MYL10Q9BUA6 226 aa18.24■□□□□ 0.51
MBD1-205ENST00000353909 KDM4AO75164 1064 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 CKAP2LQ8IYA6 745 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 ORC3Q9UBD5 711 aaPredicted RBP18.23■□□□□ 0.51
MBD1-205ENST00000353909 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
MBD1-205ENST00000353909 ZPR1O75312 459 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 FAM84BQ96KN1 310 aaPredicted RBP18.23■□□□□ 0.51
MBD1-205ENST00000353909 ZSWIM5Q9P217 1185 aa18.23■□□□□ 0.51
MBD1-205ENST00000353909 LETM1O95202 739 aaPredicted RBP18.22■□□□□ 0.51
MBD1-205ENST00000353909 ALX1Q15699 326 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 SLC10A5Q5PT55 438 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 SDR42E1Q8WUS8 393 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 CPLX1O14810 134 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 CYP7A1P22680 504 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 CDC27P30260 824 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
MBD1-205ENST00000353909 MICU3Q86XE3 530 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 MPNDQ8N594 471 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 SCN7AQ01118 1682 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 UBE2Q2LH0YL09 131 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 CLCN1P35523 988 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 ZNF384Q8TF68 577 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 NUP62CLQ9H1M0 184 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 RAI14Q9P0K7 980 aa18.22■□□□□ 0.51
MBD1-205ENST00000353909 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
MBD1-205ENST00000353909 POLR3DP05423 398 aaPredicted RBP18.21■□□□□ 0.51
MBD1-205ENST00000353909 TDO2P48775 406 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.51
MBD1-205ENST00000353909 APOA5Q6Q788 366 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 ZKSCAN3Q9BRR0 538 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 CFAP45Q9UL16 551 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms