RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
TUFT1-201ENST00000353024 CCDC173Q0VFZ6 552 aa18.14■□□□□ 0.5
TUFT1-201ENST00000353024 RALYLQ86SE5 291 aaKnown RBP18.14■□□□□ 0.5
TUFT1-201ENST00000353024 SETDB2Q96T68 719 aa18.14■□□□□ 0.5
TUFT1-201ENST00000353024 COL1A1P02452 1464 aaPredicted RBP18.14■□□□□ 0.49
TUFT1-201ENST00000353024 CYB5R4Q7L1T6 521 aa18.14■□□□□ 0.49
TUFT1-201ENST00000353024 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
TUFT1-201ENST00000353024 KLHL34Q8N239 644 aa18.14■□□□□ 0.49
TUFT1-201ENST00000353024 CHMP4CQ96CF2 233 aa18.14■□□□□ 0.49
TUFT1-201ENST00000353024 SCAND2PQ9GZW5 306 aaPredicted RBP18.14■□□□□ 0.49
TUFT1-201ENST00000353024 TSPY26PQ9H489 355 aa18.14■□□□□ 0.49
TUFT1-201ENST00000353024 ZSCAN16Q9H4T2 348 aaPredicted RBP18.14■□□□□ 0.49
TUFT1-201ENST00000353024 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
TUFT1-201ENST00000353024 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 GSG1L2A8MUP6 293 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 ZPR1O75312 459 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 APPP05067 770 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 LEO1Q8WVC0 666 aaPredicted RBP18.13■□□□□ 0.49
TUFT1-201ENST00000353024 ARMT1Q9H993 441 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 KLF18A0A0U1RQI7 1052 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 H3BQV1 296 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 ADD1P35611 737 aaKnown RBP18.13■□□□□ 0.49
TUFT1-201ENST00000353024 GYG1P46976 350 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 TFIP11Q9UBB9 837 aaKnown RBP18.13■□□□□ 0.49
TUFT1-201ENST00000353024 TACC3Q9Y6A5 838 aa18.13■□□□□ 0.49
TUFT1-201ENST00000353024 AFF2P51816 1311 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 CARMIL3Q8ND23 1372 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 LETM1O95202 739 aaPredicted RBP18.12■□□□□ 0.49
TUFT1-201ENST00000353024 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
TUFT1-201ENST00000353024 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
TUFT1-201ENST00000353024 LCORLQ8N3X6 602 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 NAP1L2Q9ULW6 460 aaPredicted RBP18.12■□□□□ 0.49
TUFT1-201ENST00000353024 NEDD4P46934 1319 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 C4AP0C0L4 1744 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
TUFT1-201ENST00000353024 TM4SF1P30408 202 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 ANP32BQ92688 251 aaKnown RBP18.11■□□□□ 0.49
TUFT1-201ENST00000353024 FAM84BQ96KN1 310 aaPredicted RBP18.11■□□□□ 0.49
TUFT1-201ENST00000353024 RRAGDQ9NQL2 400 aaPredicted RBP18.11■□□□□ 0.49
TUFT1-201ENST00000353024 KIF3AQ9Y496 699 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 SH2B2O14492 632 aaPredicted RBP18.11■□□□□ 0.49
TUFT1-201ENST00000353024 PRKAB2O43741 272 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 RPS8P62241 208 aaKnown RBP18.11■□□□□ 0.49
TUFT1-201ENST00000353024 TRDNQ13061 729 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 PDLIM2Q96JY6 352 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 FUCA2Q9BTY2 467 aa18.11■□□□□ 0.49
TUFT1-201ENST00000353024 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
TUFT1-201ENST00000353024 GOLGA8BA8MQT2 603 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 TPTE2Q6XPS3 522 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 ADGRA1Q86SQ6 560 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 SPATA32Q96LK8 384 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 LRP2BPQ9P2M1 347 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
TUFT1-201ENST00000353024 B4E1Z4 1266 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 PPFIA3O75145 1194 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 GNAT2P19087 354 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 HSPA1LP34931 641 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 FBXO33Q7Z6M2 555 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 IGDCC4Q8TDY8 1250 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 NAPBQ9H115 298 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 INCENPQ9NQS7 918 aa18.1■□□□□ 0.49
TUFT1-201ENST00000353024 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
TUFT1-201ENST00000353024 LIG1P18858 919 aa18.09■□□□□ 0.49
TUFT1-201ENST00000353024 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
TUFT1-201ENST00000353024 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
TUFT1-201ENST00000353024 PGBD1Q96JS3 809 aa18.09■□□□□ 0.49
TUFT1-201ENST00000353024 GNL3LQ9NVN8 582 aaKnown RBP18.09■□□□□ 0.49
TUFT1-201ENST00000353024 MYH15Q9Y2K3 1946 aa18.09■□□□□ 0.49
TUFT1-201ENST00000353024 ILDR1Q86SU0 546 aaPredicted RBP18.08■□□□□ 0.49
TUFT1-201ENST00000353024 CCDC24Q8N4L8 307 aa18.08■□□□□ 0.49
TUFT1-201ENST00000353024 TMEM87BQ96K49 555 aa18.08■□□□□ 0.49
TUFT1-201ENST00000353024 SENP2Q9HC62 589 aa18.08■□□□□ 0.49
TUFT1-201ENST00000353024 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.49
TUFT1-201ENST00000353024 DHX16O60231 1041 aaKnown RBP18.08■□□□□ 0.48
TUFT1-201ENST00000353024 KLRK1P26718 216 aa18.08■□□□□ 0.48
TUFT1-201ENST00000353024 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
TUFT1-201ENST00000353024 CAVIN4Q5BKX8 364 aa18.08■□□□□ 0.48
TUFT1-201ENST00000353024 SLC4A4Q9Y6R1 1079 aa18.08■□□□□ 0.48
TUFT1-201ENST00000353024 TNRC6CQ9HCJ0 1690 aaKnown RBP18.08■□□□□ 0.48
TUFT1-201ENST00000353024 CYP7A1P22680 504 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 FOSBP53539 338 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 RNF214Q8ND24 703 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 ZNF384Q8TF68 577 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
TUFT1-201ENST00000353024 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
TUFT1-201ENST00000353024 AKNAD1Q5T1N1 836 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 FAM196AQ6ZSG2 479 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 SGMS1Q86VZ5 419 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 RIOK1Q9BRS2 568 aaKnown RBP18.07■□□□□ 0.48
TUFT1-201ENST00000353024 LY9Q9HBG7 655 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 ZSWIM5Q9P217 1185 aa18.07■□□□□ 0.48
TUFT1-201ENST00000353024 CFAP45Q9UL16 551 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms