RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 MMADHCQ9H3L0 296 aaPredicted RBP13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 ZSCAN12O43309 604 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 PHC3Q8NDX5 983 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 WHAMMQ8TF30 809 aa13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
CTNNB1-201ENST00000349496 NSD2O96028 1365 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 GNAI1P63096 354 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 PHACTR1Q9C0D0 580 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 MYO3AQ8NEV4 1616 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 DYTNA2CJ06 578 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 RIPOR2Q9Y4F9 1068 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 SASH1O94885 1247 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 BRD1O95696 1058 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 TRIML1Q8N9V2 468 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 RGL1Q9NZL6 768 aa13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 TPX2Q9ULW0 747 aaKnown RBP13.91□□□□□ -0.18
CTNNB1-201ENST00000349496 EIF4E1BA6NMX2 242 aaKnown RBP13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 NAT1P18440 290 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 RAB27AP51159 221 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 UBAP1Q9NZ09 502 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 RHOXF2BP0C7M4 288 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 CCDC178Q5BJE1 867 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 FAM71BQ8TC56 605 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 RHOXF2Q9BQY4 288 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 NEO1Q92859 1461 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 IL16Q14005 1332 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 AMPHP49418 695 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 ARHGAP22Q7Z5H3 698 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 FUT8Q9BYC5 575 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 ZNHIT6Q9NWK9 470 aaKnown RBP13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 BAIAP2L1Q9UHR4 511 aa13.9□□□□□ -0.18
CTNNB1-201ENST00000349496 MAP4K4O95819 1239 aaPredicted RBP13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 ARHGAP25P42331 645 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 FILIP1LQ4L180 1135 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 B4GALNT4Q76KP1 1039 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 SDCCAG8Q86SQ7 713 aaPredicted RBP13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 C17orf50Q8WW18 174 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 USP26Q9BXU7 913 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 TMEM131LA2VDJ0 1609 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 ETF1P62495 437 aaKnown RBP13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 NCAPG2Q86XI2 1143 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 TTC21BQ7Z4L5 1316 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 NLRP6P59044 892 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 SPTY2D1Q68D10 685 aaPredicted RBP13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 TMEM110Q86TL2 294 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 FAM76AQ8TAV0 307 aa13.89□□□□□ -0.19
CTNNB1-201ENST00000349496 HSPA4P34932 840 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 CTNNBL1Q8WYA6 563 aaPredicted RBP13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 ZEB2O60315 1214 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 RNF40O75150 1001 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 IMPDH2P12268 514 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 GSDMDP57764 484 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 CCDC15Q0P6D6 951 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 FAM81AQ8TBF8 368 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 A1CFQ9NQ94 594 aaKnown RBP13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 MYL1P05976 194 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 TRIM11Q96F44 468 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 INCENPQ9NQS7 918 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 PCDHGA4Q9Y5G9 962 aa13.88□□□□□ -0.19
CTNNB1-201ENST00000349496 SLC8A1P32418 973 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 RBM26Q5T8P6 1007 aaKnown RBP13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 CCDC50Q8IVM0 306 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 LARP6Q9BRS8 491 aaKnown RBP13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 FAM135BQ49AJ0 1406 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 CCDC151A5D8V7 595 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 WHAMMP3Q1A5X7 153 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 PLEKHG4BQ96PX9 1271 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 TADA3O75528 432 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 CDC25CP30307 473 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 PAPOLAP51003 745 aaKnown RBP13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 BRD3Q15059 726 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 PPP1R13BQ96KQ4 1090 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 LZTS2Q9BRK4 669 aa13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
CTNNB1-201ENST00000349496 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
CTNNB1-201ENST00000349496 AKAP17AQ02040 695 aaKnown RBP13.86□□□□□ -0.19
CTNNB1-201ENST00000349496 MYO1EQ12965 1108 aa13.86□□□□□ -0.19
CTNNB1-201ENST00000349496 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
CTNNB1-201ENST00000349496 PAPOLBQ9NRJ5 636 aaKnown RBP13.86□□□□□ -0.19
CTNNB1-201ENST00000349496 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTNNB1-201ENST00000349496 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms