RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 C8orf58Q8NAV2 365 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 DNAJC21Q5F1R6 531 aaKnown RBP13.28□□□□□ -0.28
TRAF3-201ENST00000347662 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 GOLGA1Q92805 767 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 FRMD4BQ9Y2L6 1034 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
TRAF3-201ENST00000347662 HSP90AA4PQ58FG1 418 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 TLDC2A0PJX2 215 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-201ENST00000347662 AFMP43652 599 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 VCX3BQ9H321 246 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 ABCC1P33527 1531 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-201ENST00000347662 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
TRAF3-201ENST00000347662 N4BP3O15049 544 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 GNG11P61952 73 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 IRAK4Q9NWZ3 460 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 TBX22Q9Y458 520 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 ZEB2O60315 1214 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 ITIH3Q06033 890 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 EVI5LQ96CN4 794 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 PPFIA2O75334 1257 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 TSPY3P0CV98 308 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 TSPY8P0CW00 308 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 HARSP12081 509 aaKnown RBP13.27□□□□□ -0.28
TRAF3-201ENST00000347662 NAA16Q6N069 864 aaPredicted RBP13.27□□□□□ -0.28
TRAF3-201ENST00000347662 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.28
TRAF3-201ENST00000347662 EHBP1Q8NDI1 1231 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 MCM6Q14566 821 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 CHMP6Q96FZ7 201 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 FAM204AQ9H8W3 233 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 NPATQ14207 1427 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 LCA5Q86VQ0 697 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 FLT4P35916 1363 aa13.27□□□□□ -0.29
TRAF3-201ENST00000347662 AFAP1L2Q8N4X5 818 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 SFMBT1Q9UHJ3 866 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 LMOD1P29536 600 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-201ENST00000347662 HOXC9P31274 260 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 TMTC4Q5T4D3 741 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 CTAGE6Q86UF2 777 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 SLC8A3P57103 927 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 C4orf50Q6ZRC1 276 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 IFT81Q8WYA0 676 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-201ENST00000347662 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 B4DLN1 442 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 TXNDC9O14530 226 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
TRAF3-201ENST00000347662 MAP7Q14244 749 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 CLUL1Q15846 466 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
TRAF3-201ENST00000347662 ZNF804AQ7Z570 1209 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 NEDD9Q14511 834 aa13.26□□□□□ -0.29
TRAF3-201ENST00000347662 GSTO1P78417 241 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 RRAGBQ5VZM2 374 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 ITM2BQ9Y287 266 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 SLC4A4Q9Y6R1 1079 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 CTAGE5O15320 804 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 HCLS1P14317 486 aaPredicted RBP13.25□□□□□ -0.29
TRAF3-201ENST00000347662 CCT6AP40227 531 aaKnown RBP13.25□□□□□ -0.29
TRAF3-201ENST00000347662 PPFIBP2Q8ND30 876 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 PPP1R12CQ9BZL4 782 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 RRP9O43818 475 aaKnown RBP13.25□□□□□ -0.29
TRAF3-201ENST00000347662 SMIM24O75264 130 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 IP6K1Q92551 441 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 UBLCP1Q8WVY7 318 aaPredicted RBP13.25□□□□□ -0.29
TRAF3-201ENST00000347662 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
TRAF3-201ENST00000347662 ATP11AP98196 1134 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 ACRBPQ8NEB7 543 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
TRAF3-201ENST00000347662 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
TRAF3-201ENST00000347662 PLCB4Q15147 1175 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 MIGA1Q8NAN2 632 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 CPSF2Q9P2I0 782 aaKnown RBP13.24□□□□□ -0.29
TRAF3-201ENST00000347662 STX1AQ16623 288 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 SLC9C2Q5TAH2 1124 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 BACH2Q9BYV9 841 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 GPHNQ9NQX3 736 aaPredicted RBP13.24□□□□□ -0.29
TRAF3-201ENST00000347662 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
TRAF3-201ENST00000347662 GSDMDP57764 484 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms