RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ARMC9Q7Z3E5 817 aa15.36■□□□□ 0.05
ATXN3-201ENST00000340660 MYLIPQ8WY64 445 aa15.36■□□□□ 0.05
ATXN3-201ENST00000340660 NYXQ9GZU5 481 aa15.36■□□□□ 0.05
ATXN3-201ENST00000340660 FZD1Q9UP38 647 aa15.36■□□□□ 0.05
ATXN3-201ENST00000340660 ABCC4O15439 1325 aa15.36■□□□□ 0.05
ATXN3-201ENST00000340660 SWT1Q5T5J6 900 aaKnown RBP15.35■□□□□ 0.05
ATXN3-201ENST00000340660 OTUD7BQ6GQQ9 843 aa15.35■□□□□ 0.05
ATXN3-201ENST00000340660 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
ATXN3-201ENST00000340660 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
ATXN3-201ENST00000340660 CARD11Q9BXL7 1154 aa15.35■□□□□ 0.05
ATXN3-201ENST00000340660 RNF208Q9H0X6 261 aa15.35■□□□□ 0.05
ATXN3-201ENST00000340660 NF2P35240 595 aa15.34■□□□□ 0.05
ATXN3-201ENST00000340660 ZNF790Q6PG37 636 aa15.34■□□□□ 0.05
ATXN3-201ENST00000340660 C1QTNF1Q9BXJ1 281 aa15.34■□□□□ 0.05
ATXN3-201ENST00000340660 RNF40O75150 1001 aa15.33■□□□□ 0.04
ATXN3-201ENST00000340660 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
ATXN3-201ENST00000340660 GJA5P36382 358 aa15.33■□□□□ 0.04
ATXN3-201ENST00000340660 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
ATXN3-201ENST00000340660 SLC10A4Q96EP9 437 aa15.33■□□□□ 0.04
ATXN3-201ENST00000340660 CLMNQ96JQ2 1002 aa15.33■□□□□ 0.04
ATXN3-201ENST00000340660 ANGEL1Q9UNK9 670 aaKnown RBP15.33■□□□□ 0.04
ATXN3-201ENST00000340660 TESPA1A2RU30 521 aaPredicted RBP15.32■□□□□ 0.04
ATXN3-201ENST00000340660 ECE2O60344 883 aa15.32■□□□□ 0.04
ATXN3-201ENST00000340660 SULT6B1Q6IMI4 303 aa15.32■□□□□ 0.04
ATXN3-201ENST00000340660 LRFN3Q9BTN0 628 aa15.32■□□□□ 0.04
ATXN3-201ENST00000340660 SGPL1O95470 568 aa15.31■□□□□ 0.04
ATXN3-201ENST00000340660 MRE11P49959 708 aa15.31■□□□□ 0.04
ATXN3-201ENST00000340660 ADAMTS19Q8TE59 1207 aa15.31■□□□□ 0.04
ATXN3-201ENST00000340660 SEMA6BQ9H3T3 888 aa15.31■□□□□ 0.04
ATXN3-201ENST00000340660 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
ATXN3-201ENST00000340660 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
ATXN3-201ENST00000340660 GRK4P32298 578 aa15.3■□□□□ 0.04
ATXN3-201ENST00000340660 SCN9AQ15858 1988 aa15.3■□□□□ 0.04
ATXN3-201ENST00000340660 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
ATXN3-201ENST00000340660 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
ATXN3-201ENST00000340660 UBN2Q6ZU65 1347 aa15.29■□□□□ 0.04
ATXN3-201ENST00000340660 FOSL2P15408 326 aa15.29■□□□□ 0.04
ATXN3-201ENST00000340660 LACTBP83111 547 aaPredicted RBP15.29■□□□□ 0.04
ATXN3-201ENST00000340660 NBPF9Q3BBW0 867 aa15.29■□□□□ 0.04
ATXN3-201ENST00000340660 PAWRQ96IZ0 340 aaKnown RBP15.29■□□□□ 0.04
ATXN3-201ENST00000340660 UNC93B1Q9H1C4 597 aa15.29■□□□□ 0.04
ATXN3-201ENST00000340660 ADGRG1Q9Y653 693 aa15.29■□□□□ 0.04
ATXN3-201ENST00000340660 BBOX1O75936 387 aa15.28■□□□□ 0.04
ATXN3-201ENST00000340660 PRMT2P55345 433 aa15.28■□□□□ 0.04
ATXN3-201ENST00000340660 NBPF10Q6P3W6 841 aaKnown RBP15.28■□□□□ 0.04
ATXN3-201ENST00000340660 SLF2Q8IX21 1173 aa15.28■□□□□ 0.04
ATXN3-201ENST00000340660 DIS3LQ8TF46 1054 aaKnown RBP15.28■□□□□ 0.04
ATXN3-201ENST00000340660 FMNL2Q96PY5 1086 aa15.28■□□□□ 0.04
ATXN3-201ENST00000340660 UHRF1Q96T88 793 aaPredicted RBP15.28■□□□□ 0.04
ATXN3-201ENST00000340660 RIPOR2Q9Y4F9 1068 aa15.28■□□□□ 0.04
ATXN3-201ENST00000340660 TAF1CQ15572 869 aaPredicted RBP15.27■□□□□ 0.04
ATXN3-201ENST00000340660 SUSD4Q5VX71 490 aa15.27■□□□□ 0.04
ATXN3-201ENST00000340660 MTRQ99707 1265 aa15.27■□□□□ 0.04
ATXN3-201ENST00000340660 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
ATXN3-201ENST00000340660 DDX60Q8IY21 1712 aaKnown RBP15.26■□□□□ 0.03
ATXN3-201ENST00000340660 GNRH1P01148 92 aa15.26■□□□□ 0.03
ATXN3-201ENST00000340660 CTGFP29279 349 aa15.26■□□□□ 0.03
ATXN3-201ENST00000340660 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
ATXN3-201ENST00000340660 TTYH1Q9H313 450 aaPredicted RBP15.26■□□□□ 0.03
ATXN3-201ENST00000340660 KCNQ3O43525 872 aa15.25■□□□□ 0.03
ATXN3-201ENST00000340660 NTSR2O95665 410 aa15.25■□□□□ 0.03
ATXN3-201ENST00000340660 MAP3K11Q16584 847 aa15.25■□□□□ 0.03
ATXN3-201ENST00000340660 GMLQ99445 158 aa15.25■□□□□ 0.03
ATXN3-201ENST00000340660 SRRDQ9UH36 339 aa15.25■□□□□ 0.03
ATXN3-201ENST00000340660 GPTP24298 496 aa15.24■□□□□ 0.03
ATXN3-201ENST00000340660 DNAJB2P25686 324 aa15.24■□□□□ 0.03
ATXN3-201ENST00000340660 KIF22Q14807 665 aa15.24■□□□□ 0.03
ATXN3-201ENST00000340660 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
ATXN3-201ENST00000340660 AGBL3Q8NEM8 1001 aa15.24■□□□□ 0.03
ATXN3-201ENST00000340660 NLRP3Q96P20 1036 aa15.24■□□□□ 0.03
ATXN3-201ENST00000340660 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 FAM205AQ6ZU69 1335 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 TFRCP02786 760 aaKnown RBP15.23■□□□□ 0.03
ATXN3-201ENST00000340660 USP17L8P0C7I0 530 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 UBXN2AP68543 259 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 NECAB2Q7Z6G3 386 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 RAET1EQ8TD07 263 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 BIN2Q9UBW5 565 aaPredicted RBP15.23■□□□□ 0.03
ATXN3-201ENST00000340660 POLLQ9UGP5 575 aa15.23■□□□□ 0.03
ATXN3-201ENST00000340660 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
ATXN3-201ENST00000340660 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
ATXN3-201ENST00000340660 BRI3BPQ8WY22 251 aa15.22■□□□□ 0.03
ATXN3-201ENST00000340660 TRIM47Q96LD4 638 aa15.22■□□□□ 0.03
ATXN3-201ENST00000340660 ASB2Q96Q27 587 aa15.22■□□□□ 0.03
ATXN3-201ENST00000340660 IL21Q9HBE4 155 aa15.22■□□□□ 0.03
ATXN3-201ENST00000340660 ATXN2LQ8WWM7 1075 aaKnown RBP15.21■□□□□ 0.03
ATXN3-201ENST00000340660 DEFB118Q96PH6 123 aa15.21■□□□□ 0.03
ATXN3-201ENST00000340660 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
ATXN3-201ENST00000340660 WNT10BO00744 389 aa15.2■□□□□ 0.02
ATXN3-201ENST00000340660 MDM2Q00987 491 aaPredicted RBP15.2■□□□□ 0.02
ATXN3-201ENST00000340660 NECAB3Q96P71 396 aaPredicted RBP15.2■□□□□ 0.02
ATXN3-201ENST00000340660 EPHX3Q9H6B9 360 aa15.2■□□□□ 0.02
ATXN3-201ENST00000340660 SIPA1L3O60292 1781 aaPredicted RBP15.2■□□□□ 0.02
ATXN3-201ENST00000340660 RCCD1A6NED2 376 aa15.19■□□□□ 0.02
ATXN3-201ENST00000340660 C6orf229H3BNL8 230 aa15.19■□□□□ 0.02
ATXN3-201ENST00000340660 TLR2O60603 784 aa15.19■□□□□ 0.02
ATXN3-201ENST00000340660 GRAPQ13588 217 aa15.19■□□□□ 0.02
ATXN3-201ENST00000340660 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
ATXN3-201ENST00000340660 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
ATXN3-201ENST00000340660 NUP98P52948 1817 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms