RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TEKT1Q969V4 418 aa34.15■■■■□ 3.06
ATPAF1-201ENST00000329231 CCDC102AQ96A19 550 aa34.15■■■■□ 3.06
ATPAF1-201ENST00000329231 MRIQ9BWK5 157 aa34.15■■■■□ 3.06
ATPAF1-201ENST00000329231 ZBTB22O15209 634 aa34.14■■■■□ 3.06
ATPAF1-201ENST00000329231 THSD7BQ9C0I4 1608 aa34.14■■■■□ 3.06
ATPAF1-201ENST00000329231 PAPPA2Q9BXP8 1791 aa34.13■■■■□ 3.05
ATPAF1-201ENST00000329231 ZNF157P51786 506 aaPredicted RBP34.13■■■■□ 3.05
ATPAF1-201ENST00000329231 NOGQ13253 232 aa34.13■■■■□ 3.05
ATPAF1-201ENST00000329231 MVPQ14764 893 aaKnown RBP34.13■■■■□ 3.05
ATPAF1-201ENST00000329231 SPDYE2Q495Y8 402 aa34.13■■■■□ 3.05
ATPAF1-201ENST00000329231 XAGE2Q96GT9 111 aa34.13■■■■□ 3.05
ATPAF1-201ENST00000329231 AOX1Q06278 1338 aa34.12■■■■□ 3.05
ATPAF1-201ENST00000329231 ECM29Q5VYK3 1845 aa34.12■■■■□ 3.05
ATPAF1-201ENST00000329231 TNFAIP1Q13829 316 aa34.12■■■■□ 3.05
ATPAF1-201ENST00000329231 TTLL12Q14166 644 aaPredicted RBP34.12■■■■□ 3.05
ATPAF1-201ENST00000329231 NEUROD6Q96NK8 337 aa34.12■■■■□ 3.05
ATPAF1-201ENST00000329231 ZNF70Q9UC06 446 aaPredicted RBP34.12■■■■□ 3.05
ATPAF1-201ENST00000329231 FOXN1O15353 648 aa34.11■■■■□ 3.05
ATPAF1-201ENST00000329231 OS9Q13438 667 aaPredicted RBP34.11■■■■□ 3.05
ATPAF1-201ENST00000329231 BEGAINQ9BUH8 593 aa34.11■■■■□ 3.05
ATPAF1-201ENST00000329231 TDRD3Q9H7E2 651 aaKnown RBP34.11■■■■□ 3.05
ATPAF1-201ENST00000329231 SURF6O75683 361 aaKnown RBP34.1■■■■□ 3.05
ATPAF1-201ENST00000329231 DDX19BQ9UMR2 479 aa34.1■■■■□ 3.05
ATPAF1-201ENST00000329231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.1■■■■□ 3.05
ATPAF1-201ENST00000329231 MYH13Q9UKX3 1938 aa34.1■■■■□ 3.05
ATPAF1-201ENST00000329231 SALL1Q9NSC2 1324 aa34.09■■■■□ 3.05
ATPAF1-201ENST00000329231 CEP85Q6P2H3 762 aa34.09■■■■□ 3.05
ATPAF1-201ENST00000329231 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.09■■■■□ 3.05
ATPAF1-201ENST00000329231 ZDHHC15Q96MV8 337 aa34.09■■■■□ 3.05
ATPAF1-201ENST00000329231 FAM155AB1AL88 458 aaPredicted RBP34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 CTCFP49711 727 aaPredicted RBP34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 GORABQ5T7V8 394 aa34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 HHIPL2Q6UWX4 724 aa34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 MOB2Q70IA6 237 aa34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 ARMC9Q7Z3E5 817 aa34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 COG6Q9Y2V7 657 aa34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 NOP58Q9Y2X3 529 aaKnown RBP34.08■■■■□ 3.05
ATPAF1-201ENST00000329231 UBE2Q2LH0YL09 131 aa34.07■■■■□ 3.04
ATPAF1-201ENST00000329231 RASA3Q14644 834 aa34.07■■■■□ 3.04
ATPAF1-201ENST00000329231 SUPT20HL1Q3ZLR7 823 aa34.07■■■■□ 3.04
ATPAF1-201ENST00000329231 ZGPATQ8N5A5 531 aaKnown RBP34.07■■■■□ 3.04
ATPAF1-201ENST00000329231 CHMP4BQ9H444 224 aaKnown RBP34.07■■■■□ 3.04
ATPAF1-201ENST00000329231 PDS5AQ29RF7 1337 aaKnown RBP34.06■■■■□ 3.04
ATPAF1-201ENST00000329231 LDHBP07195 334 aaKnown RBP34.06■■■■□ 3.04
ATPAF1-201ENST00000329231 SLC10A3P09131 477 aa34.06■■■■□ 3.04
ATPAF1-201ENST00000329231 RASGRF1Q13972 1273 aa34.06■■■■□ 3.04
ATPAF1-201ENST00000329231 GPR108Q9NPR9 543 aa34.06■■■■□ 3.04
ATPAF1-201ENST00000329231 PRDX5P30044 214 aa34.04■■■■□ 3.04
ATPAF1-201ENST00000329231 TNNI2P48788 182 aa34.04■■■■□ 3.04
ATPAF1-201ENST00000329231 PRKG1Q13976 671 aa34.04■■■■□ 3.04
ATPAF1-201ENST00000329231 YTHDC1Q96MU7 727 aaKnown RBP34.04■■■■□ 3.04
ATPAF1-201ENST00000329231 PDE3AQ14432 1141 aa34.03■■■■□ 3.04
ATPAF1-201ENST00000329231 APOBEC3HQ6NTF7 200 aaKnown RBP34.03■■■■□ 3.04
ATPAF1-201ENST00000329231 TMOD2Q9NZR1 351 aa34.03■■■■□ 3.04
ATPAF1-201ENST00000329231 TCP10L2B9ZVM9 353 aa34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 PPP1R12BO60237 982 aaPredicted RBP34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 TNNI3KQ59H18 835 aa34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 COL13A1Q5TAT6 717 aaPredicted RBP34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 RASAL3Q86YV0 1011 aa34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 ZIC5Q96T25 663 aa34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 ANGEL1Q9UNK9 670 aaKnown RBP34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 FPGT-TNNI3KV9GXZ4 949 aa34.02■■■■□ 3.04
ATPAF1-201ENST00000329231 NBPF12Q5TAG4 269 aaPredicted RBP34.01■■■■□ 3.03
ATPAF1-201ENST00000329231 ZBTB40Q9NUA8 1239 aa34.01■■■■□ 3.03
ATPAF1-201ENST00000329231 CA12O43570 354 aa33.99■■■■□ 3.03
ATPAF1-201ENST00000329231 KIF23Q02241 960 aaPredicted RBP33.99■■■■□ 3.03
ATPAF1-201ENST00000329231 DIXDC1Q155Q3 683 aa33.99■■■■□ 3.03
ATPAF1-201ENST00000329231 SPTY2D1Q68D10 685 aaPredicted RBP33.99■■■■□ 3.03
ATPAF1-201ENST00000329231 RPAP2Q8IXW5 612 aaPredicted RBP33.99■■■■□ 3.03
ATPAF1-201ENST00000329231 PRDM10Q9NQV6 1147 aa33.99■■■■□ 3.03
ATPAF1-201ENST00000329231 UQCRFS1P1P0C7P4 283 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 ARID4AP29374 1257 aaPredicted RBP33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 MAP3K11Q16584 847 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 LDLRAD1Q5T700 205 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 FKBP1CQ5VVH2 108 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 ABCF2Q9UG63 623 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 DAGLAQ9Y4D2 1042 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 SSC5DA1L4H1 1573 aa33.98■■■■□ 3.03
ATPAF1-201ENST00000329231 HSPA8P11142 646 aaKnown RBP33.97■■■■□ 3.03
ATPAF1-201ENST00000329231 SPATA5Q8NB90 893 aa33.97■■■■□ 3.03
ATPAF1-201ENST00000329231 HMG20BQ9P0W2 317 aa33.97■■■■□ 3.03
ATPAF1-201ENST00000329231 HMMRO75330 724 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 LBX1P52954 281 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 CACNB3P54284 484 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 HSP90AB4PQ58FF6 505 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 C20orf194Q5TEA3 1177 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 DZIP1Q86YF9 867 aaKnown RBP33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 ERC1Q8IUD2 1116 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 REM2Q8IYK8 340 aaPredicted RBP33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 TMEM39BQ9GZU3 492 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 FZD1Q9UP38 647 aa33.96■■■■□ 3.03
ATPAF1-201ENST00000329231 CCDC158Q5M9N0 1113 aa33.95■■■■□ 3.03
ATPAF1-201ENST00000329231 FAM83AQ86UY5 434 aa33.95■■■■□ 3.03
ATPAF1-201ENST00000329231 SLF2Q8IX21 1173 aa33.95■■■■□ 3.03
ATPAF1-201ENST00000329231 TEPSINQ96N21 525 aa33.95■■■■□ 3.03
ATPAF1-201ENST00000329231 UNCXA6NJT0 531 aa33.94■■■■□ 3.02
ATPAF1-201ENST00000329231 IREB2P48200 963 aaKnown RBP33.94■■■■□ 3.02
ATPAF1-201ENST00000329231 DBNDD2Q9BQY9 259 aa33.94■■■■□ 3.02
ATPAF1-201ENST00000329231 EXOC6BQ9Y2D4 811 aa33.94■■■■□ 3.02
ATPAF1-201ENST00000329231 TTC39AQ5SRH9 613 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms