RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ADALQ6DHV7 355 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 NAT10Q9H0A0 1025 aaKnown RBP16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 EXOC5O00471 708 aa16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 DPCR1Q3MIW9 517 aa16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 ATL3Q6DD88 541 aa16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 DHX40Q8IX18 779 aaKnown RBP16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 FMR1NBQ8N0W7 255 aaPredicted RBP16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 PIH1D3Q9NQM4 214 aaKnown RBP16.33■□□□□ 0.21
ATP2C1-201ENST00000328560 PHKA1P46020 1223 aa16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 CBX1P83916 185 aa16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 LRRC8AQ8IWT6 810 aa16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 METAP2P50579 478 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 SENP2Q9HC62 589 aa16.33■□□□□ 0.2
ATP2C1-201ENST00000328560 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 NLRP10Q86W26 655 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 TBC1D10CQ8IV04 446 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 KCNG4Q8TDN1 519 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 COL18A1P39060 1754 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 USP27XA6NNY8 438 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 PDCL2Q8N4E4 241 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 RIPOR2Q9Y4F9 1068 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 AIDAQ96BJ3 306 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
ATP2C1-201ENST00000328560 ZNF202O95125 648 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 NAA30Q147X3 362 aaPredicted RBP16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 ANO1Q5XXA6 986 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 CSF1RP07333 972 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 ADD2P35612 726 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 CTSWP56202 376 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 ANGEL1Q9UNK9 670 aaKnown RBP16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 ZBTB1Q9Y2K1 713 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 MRFAP1L1Q96HT8 127 aa16.31■□□□□ 0.2
ATP2C1-201ENST00000328560 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
ATP2C1-201ENST00000328560 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
ATP2C1-201ENST00000328560 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
ATP2C1-201ENST00000328560 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
ATP2C1-201ENST00000328560 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
ATP2C1-201ENST00000328560 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
ATP2C1-201ENST00000328560 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 SARM1Q6SZW1 724 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 PFKFB1P16118 471 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 PDE6AP16499 860 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 EVCP57679 992 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 YEATS4O95619 227 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 KRT40Q6A162 431 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
ATP2C1-201ENST00000328560 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 PDE8BO95263 885 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 CDC27P30260 824 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 TRIM29Q14134 588 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 GOLGA8AA7E2F4 631 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 WDHD1O75717 1129 aaPredicted RBP16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 CDC25BP30305 580 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 V9GYY5 206 aaPredicted RBP16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 ZBTB43O43298 467 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 XPO4Q9C0E2 1151 aaKnown RBP16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 NAPBQ9H115 298 aa16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
ATP2C1-201ENST00000328560 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.2
ATP2C1-201ENST00000328560 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
ATP2C1-201ENST00000328560 SYKP43405 635 aa16.27■□□□□ 0.2
ATP2C1-201ENST00000328560 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
ATP2C1-201ENST00000328560 SPECC1Q5M775 1068 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms