RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 SLC20A2Q08357 652 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 GPR162Q16538 588 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 NRBP1Q9UHY1 535 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 FSD1Q9BTV5 496 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 TJP1Q07157 1748 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 PDE8BO95263 885 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 GRAPQ13588 217 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 CCDC158Q5M9N0 1113 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
ABCF1-201ENST00000326195 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
ABCF1-201ENST00000326195 UTYO14607 1347 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 PCNTO95613 3336 aa12.11□□□□□ -0.47
ABCF1-201ENST00000326195 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
ABCF1-201ENST00000326195 CDHR2Q9BYE9 1310 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
ABCF1-201ENST00000326195 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 TTLL6Q8N841 843 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 TAF1P21675 1872 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 HNRNPH2P55795 449 aaKnown RBP12.1□□□□□ -0.47
ABCF1-201ENST00000326195 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
ABCF1-201ENST00000326195 CCDC183Q5T5S1 534 aa12.1□□□□□ -0.47
ABCF1-201ENST00000326195 RAD17O75943 681 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 SLC5A1P13866 664 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 ZAP70P43403 619 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-201ENST00000326195 RAB11FIP3O75154 756 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 TNNT1P13805 278 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 NPR1P16066 1061 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 AOC3Q16853 763 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 RAI14Q9P0K7 980 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 LRP2BPQ9P2M1 347 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 GGA1Q9UJY5 639 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-201ENST00000326195 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
ABCF1-201ENST00000326195 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-201ENST00000326195 CHMLP26374 656 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 CUL4AQ13619 759 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
ABCF1-201ENST00000326195 FAM53CQ9NYF3 392 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 ZNF804BA4D1E1 1349 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 GOLGA6L4A6NEF3 574 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 SMTNL1A8MU46 457 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 ZKSCAN1P17029 563 aaPredicted RBP12.08□□□□□ -0.48
ABCF1-201ENST00000326195 RBM5P52756 815 aaKnown RBP eCLIP12.08□□□□□ -0.486e-7■■□□□ 11.4
ABCF1-201ENST00000326195 GTF2IP78347 998 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 RASSF7Q02833 373 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 MTX1Q13505 466 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 CCDC186Q7Z3E2 898 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 RGS22Q8NE09 1264 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 ZNF446Q9NWS9 450 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 GJA3Q9Y6H8 435 aa12.08□□□□□ -0.48
ABCF1-201ENST00000326195 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
ABCF1-201ENST00000326195 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
ABCF1-201ENST00000326195 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 CCDC129Q6ZRS4 1044 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 LARP6Q9BRS8 491 aaKnown RBP12.07□□□□□ -0.48
ABCF1-201ENST00000326195 BSDC1Q9NW68 430 aaPredicted RBP12.07□□□□□ -0.48
ABCF1-201ENST00000326195 FBXO38Q6PIJ6 1188 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 NUP98P52948 1817 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 APPP05067 770 aa12.07□□□□□ -0.48
ABCF1-201ENST00000326195 ZNF215Q9UL58 517 aaPredicted RBP12.07□□□□□ -0.48
ABCF1-201ENST00000326195 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
ABCF1-201ENST00000326195 SCNN1DP51172 638 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 SYCP1Q15431 976 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 SECISBP2LQ93073 1101 aaKnown RBP12.06□□□□□ -0.48
ABCF1-201ENST00000326195 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 PLA2G12BQ9BX93 195 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
ABCF1-201ENST00000326195 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
ABCF1-201ENST00000326195 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
ABCF1-201ENST00000326195 PTGER2P43116 358 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 CNKSR1Q969H4 720 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 CCDC112Q8NEF3 446 aa12.06□□□□□ -0.48
ABCF1-201ENST00000326195 USP27XA6NNY8 438 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 SOCS7O14512 581 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms