RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
TPM3-204ENST00000323144 DZIP1LQ8IYY4 767 aaKnown RBP15.48■□□□□ 0.07
TPM3-204ENST00000323144 ZNF296Q8WUU4 475 aaPredicted RBP15.48■□□□□ 0.07
TPM3-204ENST00000323144 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
TPM3-204ENST00000323144 MEIS3Q99687 375 aa15.48■□□□□ 0.07
TPM3-204ENST00000323144 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
TPM3-204ENST00000323144 KIF16BQ96L93 1317 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 CCER2I3L3R5 266 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 EYA2O00167 538 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 UBTFL1P0CB47 393 aaPredicted RBP15.47■□□□□ 0.07
TPM3-204ENST00000323144 TM4SF4P48230 202 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 SOX10P56693 466 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 CTU1Q7Z7A3 348 aaKnown RBP15.47■□□□□ 0.07
TPM3-204ENST00000323144 TMEM39BQ9GZU3 492 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 TNNQ9UQP3 1299 aa15.47■□□□□ 0.07
TPM3-204ENST00000323144 LRRFIP2Q9Y608 721 aaKnown RBP15.47■□□□□ 0.07
TPM3-204ENST00000323144 IGF2BP3O00425 579 aaKnown RBP eCLIP15.46■□□□□ 0.07
TPM3-204ENST00000323144 CAVIN4Q5BKX8 364 aa15.46■□□□□ 0.07
TPM3-204ENST00000323144 PA2G4Q9UQ80 394 aaKnown RBP15.46■□□□□ 0.07
TPM3-204ENST00000323144 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
TPM3-204ENST00000323144 GPR25O00155 361 aa15.45■□□□□ 0.06
TPM3-204ENST00000323144 PPP1R12BO60237 982 aaPredicted RBP15.45■□□□□ 0.06
TPM3-204ENST00000323144 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
TPM3-204ENST00000323144 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
TPM3-204ENST00000323144 TNFAIP1Q13829 316 aa15.45■□□□□ 0.06
TPM3-204ENST00000323144 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
TPM3-204ENST00000323144 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
TPM3-204ENST00000323144 DOCK1Q14185 1865 aa15.45■□□□□ 0.06
TPM3-204ENST00000323144 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
TPM3-204ENST00000323144 USP2O75604 605 aaPredicted RBP15.44■□□□□ 0.06
TPM3-204ENST00000323144 IFIT1P09914 478 aaKnown RBP15.44■□□□□ 0.06
TPM3-204ENST00000323144 CT47B1P0C2W7 299 aaPredicted RBP15.44■□□□□ 0.06
TPM3-204ENST00000323144 ZBTB48P10074 688 aaPredicted RBP15.44■□□□□ 0.06
TPM3-204ENST00000323144 SLC5A1P13866 664 aa15.44■□□□□ 0.06
TPM3-204ENST00000323144 IREB2P48200 963 aaKnown RBP15.44■□□□□ 0.06
TPM3-204ENST00000323144 TBC1D22AQ8WUA7 517 aa15.44■□□□□ 0.06
TPM3-204ENST00000323144 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
TPM3-204ENST00000323144 API5Q9BZZ5 524 aaKnown RBP15.44■□□□□ 0.06
TPM3-204ENST00000323144 CDK5RAP2Q96SN8 1893 aa15.44■□□□□ 0.06
TPM3-204ENST00000323144 ATAD5Q96QE3 1844 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 PTPRFP10586 1907 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 MANSC4A6NHS7 340 aaPredicted RBP15.43■□□□□ 0.06
TPM3-204ENST00000323144 RGS19P49795 217 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 MLLT1Q03111 559 aaPredicted RBP15.43■□□□□ 0.06
TPM3-204ENST00000323144 VGLL4Q14135 290 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 ATP2B3Q16720 1220 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 SUPT20HL1Q3ZLR7 823 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 IFNL1Q8IU54 200 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 LPIN2Q92539 896 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 CFHR5Q9BXR6 569 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 HPS5Q9UPZ3 1129 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 MAST3O60307 1309 aa15.43■□□□□ 0.06
TPM3-204ENST00000323144 RFX7Q2KHR2 1363 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 PRDX5P30044 214 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 ADORA1P30542 326 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 PHKA1P46020 1223 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.42■□□□□ 0.06
TPM3-204ENST00000323144 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 OPTNQ96CV9 577 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 ZDHHC15Q96MV8 337 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 PHIPQ8WWQ0 1821 aa15.42■□□□□ 0.06
TPM3-204ENST00000323144 MYO5AQ9Y4I1 1855 aaKnown RBP15.42■□□□□ 0.06
TPM3-204ENST00000323144 SIPA1L1O43166 1804 aa15.41■□□□□ 0.06
TPM3-204ENST00000323144 CIAO1O76071 339 aa15.41■□□□□ 0.06
TPM3-204ENST00000323144 APOBEC3HQ6NTF7 200 aaKnown RBP15.41■□□□□ 0.06
TPM3-204ENST00000323144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.41■□□□□ 0.06
TPM3-204ENST00000323144 DAGLAQ9Y4D2 1042 aa15.41■□□□□ 0.06
TPM3-204ENST00000323144 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 FKTNO75072 461 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 TRIM27P14373 513 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 TNNI2P48788 182 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 HDLBPQ00341 1268 aaKnown RBP15.4■□□□□ 0.06
TPM3-204ENST00000323144 CAP1Q01518 475 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 CRHR2Q13324 411 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 NOM1Q5C9Z4 860 aaKnown RBP15.4■□□□□ 0.06
TPM3-204ENST00000323144 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
TPM3-204ENST00000323144 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.4■□□□□ 0.06
TPM3-204ENST00000323144 INTS3Q68E01 1043 aaKnown RBP15.39■□□□□ 0.05
TPM3-204ENST00000323144 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
TPM3-204ENST00000323144 PTPN18Q99952 460 aa15.39■□□□□ 0.05
TPM3-204ENST00000323144 BCAR3O75815 825 aa15.38■□□□□ 0.05
TPM3-204ENST00000323144 BRI3BPQ8WY22 251 aa15.38■□□□□ 0.05
TPM3-204ENST00000323144 WRNIP1Q96S55 665 aa15.38■□□□□ 0.05
TPM3-204ENST00000323144 TMOD2Q9NZR1 351 aa15.38■□□□□ 0.05
TPM3-204ENST00000323144 SUGT1Q9Y2Z0 365 aa15.38■□□□□ 0.05
TPM3-204ENST00000323144 ATRNL1Q5VV63 1379 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 UNCXA6NJT0 531 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 ALDH1A1P00352 501 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 IL15P40933 162 aaPredicted RBP15.37■□□□□ 0.05
TPM3-204ENST00000323144 NFIAQ12857 509 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 RASGRF1Q13972 1273 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 HHIPL2Q6UWX4 724 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 WDR66Q8TBY9 1149 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 CD99L2Q8TCZ2 262 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 MS4A4AQ96JQ5 239 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 COPRSQ9NQ92 184 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 CEP126Q9P2H0 1117 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms